| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2305 |
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| Symbol | tpn |
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| ID | 4185216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2672850 |
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| End bp | 2673590 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638072305 |
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| Product | IS3 family transposase |
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| Protein accession | YP_678908 |
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| Protein GI | 110638699 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.624164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGATACTCA TTGACAGAAG AAAGGCTATC AAACAACTGG TAGATACACA AAGAAAGCAG
CTTCCTAGAT TAGGAGGAAA AAAGACTTAC CATATTATAA AGCCGTTTAT TGATCAGGCA
GAACTCAAAG TTGGCCGGGA TAAACTCTTC TCAATATTAA GGTTTTATGA TATGCTTATT
AAGCCCAGGC GCAGATATAT TCAAACAACG ATGTCTAAGC ATTGGCTCAG GAAATATCCC
AATATAGTGA AAGGGCTCAT CATACATAGA CCTGAGCAGG TATGGGTTAG TGACATCACA
TACATAAAAA CAGATGAAGG AAACTGCTAT TTAAATATGG TCACTGATGC CTACAGCAGA
AAAATAATGG GCTACTCTAT AGCAGACTCT ATGGATACAG AATCCATGAT AAAAGCGTTT
GAAATGGGAT TGAAAAATAG AAAGTATCCT GATTCAAAAT TGATTCATCA TTCTGACAGA
GGGCTTCAGT ATTGCAGTAA AGAATATGTA GCATTGTCAA ATAGCAATGG AGTAAGCATA
AGTATGACCG AACAATCTGA CCCTTATGAA AATGCGTTAG CTGAAAGGAT GAATAGAACG
CTCAAAGAAG AATTTGGATT AGGTCAAAAA ATAATAACCA GACAAGTAGC AAAAGAGCTT
ACTGAGCAAG CAATACAATT ATATAATAAC GTAAGACCTC ATTTATCATT AAAAATGAAA
ACGCCAGAAA TGGTGCATTA A
|
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| Protein sequence | MILIDRRKAI KQLVDTQRKQ LPRLGGKKTY HIIKPFIDQA ELKVGRDKLF SILRFYDMLI
KPRRRYIQTT MSKHWLRKYP NIVKGLIIHR PEQVWVSDIT YIKTDEGNCY LNMVTDAYSR
KIMGYSIADS MDTESMIKAF EMGLKNRKYP DSKLIHHSDR GLQYCSKEYV ALSNSNGVSI
SMTEQSDPYE NALAERMNRT LKEEFGLGQK IITRQVAKEL TEQAIQLYNN VRPHLSLKMK
TPEMVH
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