Gene CHU_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2298 
Symbol 
ID4185209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2666887 
End bp2668002 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content36% 
IMG OID638072298 
Producthypothetical protein 
Protein accessionYP_678901 
Protein GI110638692 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0296876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATG TACAAATTTC CCGGTTGCTT CAGAATTTAC TGATTACTGT TATTCTGGTT 
ACTACAATGA TATTTGCCAG TACCTGGTTA ATACCGGTAT CATGGGCATT TTTATTTGCC
TGCCTGTTAT ATCCCGTTTG CATGTTCATT GAACGCAAAG GCCTGAACCG CACACTCACT
TCTATGCTTG TAACATTGCT TTTTTGTGTG ATCATGTTTT TTATCATGTA CTTTCTGATC
ATGCAGGCAT TGCTCATCAT ACAAACGAAT GATAATGTGT TGCATAAAAT TAAAGAAGGA
ATTGAATCCG TTATTTTACA CATTCAATCT AAAACAGGAT TAGAATTTTA TCACCCGCAT
AGTTTAAAAG AAAGCCTTAG TACTATTTTC CAAAATGGCA TGAGCGTTAT CTCTACACAA
TTGAGCAGCG TTGGAACCAA CGTTCTTACG ATTGCGCTTA CGCCGGTGTT TTTATTTTTC
ATTTTAAATT TAAGAGGACT TGTTAAAGCG TTCTATATAA AAAATTATAA AGGCAATGAT
CTTGAATCGA TCCAGACGTT TATTACAAAG TCATTGACGT CCATGAAAAA TTATTTATGG
GGAACAATGA TCCTCACGGC TGTAACAGCA GTCATGACTT ACATCATCCT GATGTTATTC
GGTGTAAAAT CGGCCATCTT CTTCAGTGTT TTTCTCGCCA TTTTAAATAT CATTCCCTAT
CTGGGGAATT TAATTGCTTA TATTGCCATT TTATCTTTCG TTTGGGTAAC AAAAGAGTCT
GTTTCAATTC TTATTTATAT TACCATCTGT TTATATTTTT CAAACATGAT TCAGGAAAAT
ATTTTACGTC CAAAACTTGT TGGTGATAAA ATGGAGATCA ATGCATTTCT TGTACTGTCT
GCGGTGATGT TAGGCGCAAT CATCTGGGGA GTATCGGGTA TGGTATTATT TGTACCGTTT
TTAGGCATTG CAAAAGCATT GGTGGAAAGC AATCCGGAAT GGAATAAATA CGCGCTCCTT
TTTGCTTCCG CAGATCATAC AAAAAAAATT CCTTTTGCAA AATTGAAAGA AAAAATCGGC
GCAAAGAAAT CAAACGGTTC CACACCAGAT GTATAA
 
Protein sequence
MEHVQISRLL QNLLITVILV TTMIFASTWL IPVSWAFLFA CLLYPVCMFI ERKGLNRTLT 
SMLVTLLFCV IMFFIMYFLI MQALLIIQTN DNVLHKIKEG IESVILHIQS KTGLEFYHPH
SLKESLSTIF QNGMSVISTQ LSSVGTNVLT IALTPVFLFF ILNLRGLVKA FYIKNYKGND
LESIQTFITK SLTSMKNYLW GTMILTAVTA VMTYIILMLF GVKSAIFFSV FLAILNIIPY
LGNLIAYIAI LSFVWVTKES VSILIYITIC LYFSNMIQEN ILRPKLVGDK MEINAFLVLS
AVMLGAIIWG VSGMVLFVPF LGIAKALVES NPEWNKYALL FASADHTKKI PFAKLKEKIG
AKKSNGSTPD V