Gene CHU_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2280 
SymbolhtrB 
ID4186667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2653032 
End bp2653955 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content40% 
IMG OID638072280 
Productlipid A biosynthesis lauroyl acyltransferase (heat shock protein) 
Protein accessionYP_678883 
Protein GI110638674 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.56438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAG ATAACCGTCC TTTCCTGAAA CGATTAAAAT ATACCTTACT ATTCTGGCTG 
GTAAAAACCT TGATTTTTGT TACCGAAAAA TTACCCCGGC CGGTTGTATA TTTTGTATAC
GGGGGGTTAG GAAGACTGGC CTATTACTTT GCCGGTGAAC CAAGACGCAG AGCAATTAAA
AATTTAACGA TTGTTTTTGG CAAAGAAAAA ACGCAGGAAG AGATAAAAGC CATTACAAAA
AAAATGTTTA TGAACTTAGG AAAAAACCTG GCAACTGTAA TGCGGGTATT CCCAATGGAA
AATTTAGATC AGTTCTATAA ACAGGTAAGG ATAATCGGCA AAGAAAATCT GGATGAAGCG
TATGCAAAAG GCAAAGGAGT TGTATTACTT ACAGCACATA TCGGAGCCTT TGAAATTTTA
GGAACGTTTA TCGGTTTAAA TTATAAATCG ATTATGGTAG GTACAAAATT AAAAGATCCG
CGGCTGGATG ATTTAATTGT GCGTTCACGT TCTAAAGGCG GAAGCAAATA CGTGCACCGC
GGTGAAAACA CCTTACAGCT TATGCGCAGC CTGAAAGAAG GCCGTGTCAT GATTATATTA
ATTGATCAGG ATACAAAAGT TAAAAGCCGC TTTGTTGATT TTATGGGCGT ACCGGCAGCA
ACGCCTGTTG GCGCTACCAT GATCGCACTT AAATCGGGTG CAGACATTGT ACCTGTAATA
GTTCAAATGG ACGAACACGA CAATCAAACC ATCACCTGCA TGCCTGCGCT GGAAGTAACC
AGAAGCGGAG ATCCGGAACA GGATTTATTG GATAATACCT TACGTATGAA TCAGGCAGTT
GATGCATTTA TCCGAAAAGA TCCTTCACAA TGGGTCTGGA TGCACGAACG TTTTAAAACA
AAGCCTGGTG AAGAAATACA ATAA
 
Protein sequence
MEADNRPFLK RLKYTLLFWL VKTLIFVTEK LPRPVVYFVY GGLGRLAYYF AGEPRRRAIK 
NLTIVFGKEK TQEEIKAITK KMFMNLGKNL ATVMRVFPME NLDQFYKQVR IIGKENLDEA
YAKGKGVVLL TAHIGAFEIL GTFIGLNYKS IMVGTKLKDP RLDDLIVRSR SKGGSKYVHR
GENTLQLMRS LKEGRVMIIL IDQDTKVKSR FVDFMGVPAA TPVGATMIAL KSGADIVPVI
VQMDEHDNQT ITCMPALEVT RSGDPEQDLL DNTLRMNQAV DAFIRKDPSQ WVWMHERFKT
KPGEEIQ