Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2267 |
Symbol | |
ID | 4184302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2635712 |
End bp | 2637484 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638072269 |
Product | hypothetical protein |
Protein accession | YP_678872 |
Protein GI | 110638663 |
COG category | [S] Function unknown |
COG ID | [COG2433] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.22249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACAC GAATCCTTAC CTTACTTACG TGTTTTTTTT TACTGCTTCC GGTGCAGGCG CAGCTTGTAT TGGATGAATA TACCAGTGAC ATTTTTTTAA CCGATAAAAA TTCTTTCTTT GGTATTCATA CCGGCGATAC CGCTTATTAC TGGATCGAAA CAAACATTCA AAAAAACACC TCATCCGATT TTTTGATTGA ATGCCTGGCC CCTCAGCTGA AAGAAGTAAA GTGTTATGTA TTGAATCAGG GAAAAGATAC CATCCGTTCT TTTATAACCG GCGCAGCGTA TCCGTTTTCC CAGCGTTACC TGCAGCATAA AAATTTTATT TTTCCATTGA ATATGGAACC TGGTGTGTAT ACCATTTGTA TTGGTGTGCG GGACATTCAA CCCGATGAAT TATATTTTAA GATCCGTTCT GATCATTTCT TTACCGAATA TGCCATCTCG GAGTATTTCT TTTTAGGTTG TTATTATGGC GTACTGCTGA TTGTACTGCT GTATAATTTA TTTCTGTACA TGAAAGGTGC CATGCGCGTT CATATTCTGT ACGTCTTTTA TATCATAGGC TGTATTGCCT TGTCTGTGCG TGAAGATGGT ATAGCCTACC AATATGTATT ATCTTATTTC CCTTCGTTGA ATTTTATTTT TAACCTGTAT CTGGCCAAAC CAATATTTCT GAGCACATTT ATTGTATATT CTGTTTCATT TTTAGAGATA AAACGTTATG CGGCAGGCAT CAAAAAACTG CTGCTGTTTT TACTTGGTAT ATATGTTTGT ATGCTGTTGC TTTCTATAGC AATACCTGCT CTTATGCTGC TTTCAGAATA TGTGTTCTTC TCCGTTTTCA TTATTGTTTA TATCACTTCG TTATTTATTG CAAAAAAAGG AAATCATTTT GCATACTATT TCTTTGCGGG CTTTTCCATG GTTATGCTAA GTGTACTGAT CAATCTGCTG CGTTCCTTTA ATATCCTTCC ATCAACTATT TTTACGGTAT ATAGTTTTAA TTATGGTATT ATATTGGAAG TAATTATTTT CTCCGTAGCA CTAGCTGATA AGATCCGGAT CATTCAGCAG GAAAAGGAGC AGAGCAAAGA AGCATTGATT GTACAGTTGA GTGAGAATGA TGGTTTGCAG CAGCGTTTGA TTGTAGAGCT GGAAGAAAAG AAAACATTGC AGGAAAAAGT TAACCGTGAA TTGGAAACCA AAGTACGGGA GCGTACAGCT GAACTCCAAT CGGCAAATGA AAAGTTAGAA GCGTTTGCAA AAGAAACAGA CCGGTTAAAT TCTGAATTAG ACCGCTTTAA CTATGCCTTG CAAAAAGAGA TCAAAGAAGA AAAAATTTCG CGTATTTATA ATCAGGATGT TTCATATGAA GAATTTTTGA ACACTTACCC GGACGATGAT ACCTGTTTAA AAGTAATTCA GCAACTGAAA TGGCCGGATG GATTTGTCTG TAAGAAATGC GGCAACACAA AAGCCAGCAA TGCCGGCGTG TGGTACCGGA AGAAATGCAG CAAGTGCGGT ACTATTGAAT CAATTACGGC GAATACCTTA TTTCATCATT TGAAATTCCC GTTGAATAAA GCATTTTATT TGACGTATGT AGAGTTCTCA AACATGAAAC AGACAGACGA AGCATTGTCT GAATTGATCG ATCTGCGCAA GCCCACAATC TGGGCATACC GTAAAAAAGT AGAAGAACGC ATGGCCGATA AAAATTATAA AAAAGCAACC AATTGGAAAG ATATCGTATT GGATCTGCTG TAG
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Protein sequence | MITRILTLLT CFFLLLPVQA QLVLDEYTSD IFLTDKNSFF GIHTGDTAYY WIETNIQKNT SSDFLIECLA PQLKEVKCYV LNQGKDTIRS FITGAAYPFS QRYLQHKNFI FPLNMEPGVY TICIGVRDIQ PDELYFKIRS DHFFTEYAIS EYFFLGCYYG VLLIVLLYNL FLYMKGAMRV HILYVFYIIG CIALSVREDG IAYQYVLSYF PSLNFIFNLY LAKPIFLSTF IVYSVSFLEI KRYAAGIKKL LLFLLGIYVC MLLLSIAIPA LMLLSEYVFF SVFIIVYITS LFIAKKGNHF AYYFFAGFSM VMLSVLINLL RSFNILPSTI FTVYSFNYGI ILEVIIFSVA LADKIRIIQQ EKEQSKEALI VQLSENDGLQ QRLIVELEEK KTLQEKVNRE LETKVRERTA ELQSANEKLE AFAKETDRLN SELDRFNYAL QKEIKEEKIS RIYNQDVSYE EFLNTYPDDD TCLKVIQQLK WPDGFVCKKC GNTKASNAGV WYRKKCSKCG TIESITANTL FHHLKFPLNK AFYLTYVEFS NMKQTDEALS ELIDLRKPTI WAYRKKVEER MADKNYKKAT NWKDIVLDLL
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