| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2255 |
|---|
| Symbol | |
|---|
| ID | 4184290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 2627058 |
|---|
| End bp | 2628581 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638072257 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_678860 |
|---|
| Protein GI | 110638651 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2268] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0576037 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGT TTATTATTAT TGTTGTTGTT GCCGTCGTTG TCGGTTTTGT ATTAATATCC
TCCTTACTAT CGCGCTACAA ACGTTGTCCT TCAGATAAAA TACTTGTTAT TTACGGACGT
ACCGGCGGTT CTTCTGCGAA GTGTGTACAC GGTGGTGGTG CCTTTATCTG GCCCGTTATT
CAGGATTATG CTTTTTTAGA TTTAAAACCA TTATCGATTG AAGCGAATTT AACGAATGCA
TTAAGCCGCC AGAACATCCG TGTGGATGTA CCTTGCCGCT TTACGATTGC AATCTCTACC
GAAGCAGATA CCATGAATAC GGCTGCTGAA AGATTATTAG GATTATCACA CGAAAACATT
CAGGAATTGG CGAAAGATAT TTTGTTCGGT CAGTTACGTT TGGTTATTGC AACCATGACA
ATTGAAGAGA TCAACTCAGA CCGTGATAAA TTTTTAGAAA ACATTTCTAA AAACGTAGAC
AGCGAATTGA AAAAAATCGG TTTGAAACTG ATTAACGTAA ACGTAACCGA TATCAAAGAT
GAATCTGGTT ACATTGCTGC TTTAGGTAAA GAAGCTGCTG CGAAAGCGAT CAACGAAGCG
AAAGTAAGTG TTGCCGAGCA GGAGAAAATA GGTGAAACGG GTAAGGCATT AGCGGATAGA
GAAAAAGATA CACAGATTGC TGAAACGCAC AGAGACCGTG ATGTTAAGAT CGCAATTACA
CAAAAAGACA GAGAGATCAG TATTGCGTCT GCTGAAAAAG ATGAAGCAAT TGGTAAAGCA
GAAGCACAAC GCGATACCCG TGTAAAAACA TCTGAAGCAA ACGCGATCGC GATTAAAGGG
GAAAATGAAG CAAAAATTTC GATTGCAAAT TCTGAAGCCC TTCGTAGAGA AAAAGAAGCA
GAATCTTTAC GTATAGCCAT TACCGCTGAA AAAGTTCAAC AGGCAAAGGC GTTGGAAGAA
GCATACGTGG CAGAACAAAG AGCCGAATTA GCGCGTTCGG AAAGAGAACG TTCCACACAG
ATCGCCAACA TTGTTATTCC GGCAGAGATC GCTAAACAAC GTGCAATCAT TGAAGCGCAG
GCAGAAGCGG AACGTATCAG AGAAAATGCA AAAGGTGAAG CCGATGCGAT TTATGCAAAG
ATGGAAGCAG AAGCAAAAGG TTTGTATGAA ATATTAACCA AACAGGCACA AGGTTACAAA
GACGTTGTTG CTGCTGCGGG TGGAGATCCG ACAAAAGCAT TCCAGCTATT GTTAATTGAA
AAACTTCCTG AATTAGTGAA AACACAGGTT GAAGCAGTTA AAAATATTAA AATTGACAAG
ATCACTGTTT GGGATTCCGG CAATGGAAAT TCAGACAATG GTAACTCTTC TACGGCAAAC
TTTGTTTCCG GCATGATGAA AACTGTACCT CCGTTGAATG ACTTGTTCAA CATGGCCGGT
CTTAACTTAC CAACGTATTT AAAAGGAGAA GATACACCTA AAGACATTAC TCCGTTAGAG
CCTGGTGATG GTGCTAAAAA ATAA
|
|---|
| Protein sequence | MTQFIIIVVV AVVVGFVLIS SLLSRYKRCP SDKILVIYGR TGGSSAKCVH GGGAFIWPVI
QDYAFLDLKP LSIEANLTNA LSRQNIRVDV PCRFTIAIST EADTMNTAAE RLLGLSHENI
QELAKDILFG QLRLVIATMT IEEINSDRDK FLENISKNVD SELKKIGLKL INVNVTDIKD
ESGYIAALGK EAAAKAINEA KVSVAEQEKI GETGKALADR EKDTQIAETH RDRDVKIAIT
QKDREISIAS AEKDEAIGKA EAQRDTRVKT SEANAIAIKG ENEAKISIAN SEALRREKEA
ESLRIAITAE KVQQAKALEE AYVAEQRAEL ARSERERSTQ IANIVIPAEI AKQRAIIEAQ
AEAERIRENA KGEADAIYAK MEAEAKGLYE ILTKQAQGYK DVVAAAGGDP TKAFQLLLIE
KLPELVKTQV EAVKNIKIDK ITVWDSGNGN SDNGNSSTAN FVSGMMKTVP PLNDLFNMAG
LNLPTYLKGE DTPKDITPLE PGDGAKK
|
|---|
| |