Gene CHU_2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2244 
SymbolyicL 
ID4183778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2614510 
End bp2615403 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content41% 
IMG OID638072246 
ProductDMT family permease 
Protein accessionYP_678849 
Protein GI110638640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.705911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAT CAATACCGGC CGGCGGAATA GCAAAGGCAT TAGCTTCGGC TCTGTTATGG 
GGTATTTCAG GAACCTTTGC TCAATATGTA TTTGAAGAAA AACACATTGA TCCGTCGTGG
CTTGTAACCA TGCGACTGCT GGTTTCCGGA TTTACATTAC TTGTATTCGG TGCATTCAAA
CGCGATAAAG ATTTCATATT GATCTGGCAA AACAAACGGG ATGTAGTACA GCTGATTCTT
TTTGCCATGT TGGGTATGTT TGCCGTTCAG TATACCTACT TCGCAGCAAT TGTAGCTTCC
AATGCAGCAA CTGCTACTGT GCTTCAATAT ACCGGTCCAG TATTCATCGT TGTTTATTTT
GCAATTCTAC AGAAAAAAAT ACCCGTAGCT ATAGAACTTG CTGCAATTGT ATTGGCATTT
ACAGGTGTAT TTTTTTTGGT AACGCATGGT GATATTCATA GTCTTGCAAT TTCCTCAGAA
GCGTTTGTGT GGGGCATCAG CTCTGCGGTA GCGTTAATGA TGTATTCTAT ATTACCAATT
CCTTTATTGC AGAAGTATTC ATCCTTCCCG GTGATTGGCT GGGGTATGCT TCTTGGTGGA
ATTATACCGG TTTTCATCGC TGCACCCTGG AACATAACAG GCATCTGGGA TGTCTATACG
TTTCTTTCTG TAAGCTTTAT TATTTTACTC GGCAGCCTGG CGGCTTTTTA CATGTATATA
ACCGCAGTAA AAGAGATCGG TGCCCAGACA GCAAGCTTAC TGGCTTGTAC AGAACCTTTG
GCTGCAGTAC TGCTTTCTGT ATGCTGGCTG CATGTATCTT TTTTATGGAG TGACTGGGTA
GGTACAATCT GTATTCTGAT CACCATACTA CTTTTAAGCA GTATGAAAAA ATAA
 
Protein sequence
MGKSIPAGGI AKALASALLW GISGTFAQYV FEEKHIDPSW LVTMRLLVSG FTLLVFGAFK 
RDKDFILIWQ NKRDVVQLIL FAMLGMFAVQ YTYFAAIVAS NAATATVLQY TGPVFIVVYF
AILQKKIPVA IELAAIVLAF TGVFFLVTHG DIHSLAISSE AFVWGISSAV ALMMYSILPI
PLLQKYSSFP VIGWGMLLGG IIPVFIAAPW NITGIWDVYT FLSVSFIILL GSLAAFYMYI
TAVKEIGAQT ASLLACTEPL AAVLLSVCWL HVSFLWSDWV GTICILITIL LLSSMKK