| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2232 |
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| Symbol | |
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| ID | 4185792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2599072 |
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| End bp | 2600976 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638072233 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_678837 |
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| Protein GI | 110638628 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.319875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.773319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTT CTATACATGA AATTCTCAAA ACCTATTGGG GCCATTCAAA CTTTCGTCCG
CTTCAGGAGG ATATCATAAA TTCTATTTTA GGAGGCAATG ACACCGTTGC GCTTTTACCA
ACGGGCGGAG GCAAATCTAT TTGCTATCAG GTGCCCGCCC TGGCAAGAGA TGGATTGGTA
TTGGTTATCA GTCCGCTCAT TGCATTAATG AAAGACCAGG TAGAACAGTT GCGCCGTAGA
GGCATTATTG CTACAGCAAT CCATTCAGGC CTGCGCAAAA CAGAAATCGA TATTGCACTT
GATAATTGTA TTTATGGAAA TATAAAATTG CTGTACGTTT CTCCTGAACG GTTAAAATCT
GATCTGTTTA AAGAGCGTGT AGAGAAGATG AAGATCATTT GTATTGCTAT CGATGAAGCG
CATTGTATCT CCGAATGGGG CCATGATTTC AGACCTGCTT ACAGGGAGAT CGCATCAATC
CGTACGCTGC TTCCTGAAGT GCCTGTGATT GCACTTACTG CTACGGCCAA TGAAATGGTG
CTGAATGATA TCATGGATCA ACTGGCGCTC CAGAATCCGC AGATATTTAC ACAAAGTTTT
ACCCGTAAAA ATTTATCGTA CTCGTGCTTG TACGAAGAGA ATAAAGAGAA ACGACTTGTG
TCGATGCTGC AAAAGATTCC CGGCGTATGT ATCGTATATG CCAATACCCG CGCACGTGTG
GTAAGGATTG CGGAGTTTCT GAATCGGCAG GGCATTCCAA CAGAATTCTA TCACGGCGGA
CTTGATCATA AGCAACGCAG CATTAAGCAG GACGCATTTA TGAAAAATAC CGTACGTGTA
ATGGTTGCTA CCAATGCATT CGGTATGGGC GTTGACAAGC CCGATGTGCG ACTGGTTGTG
CATATGGATG TACCCGATTC ACTGGAAGGT TATTTTCAGG AAGCCGGCAG GGCAGGACGT
GACGGTAATA AAGCCTTTGC TGTTTTGCTG CATACAAAGA AAGACGAAGA GGAATTGCTG
GCTAAAATTC CCGTGGCACA CCCATCTCCC GAAGTGATCC GGAGAATGTA TCAATCGCTG
GCAAACTATT ATCAACTGGC AGTAGGCAGT GGGTATATGG AAAGTTATCC GTTCGATTTA
GACGAATTCT GCAAAAAATA TAATCACAAT AAATTAGAGG CATTCTATTC CTTAAAGCGG
ATGGAGCAGC ATGGGATTAT CCAGCTCAGT GAAGCATTCT ACAATCCACC CAAATTAAAG
GTAATTGTAG ATCATGAGCA TCTGTATGAT GCCCGTTTGA AAATGCCTAA GTATGATGAA
TTTATTAAGC AGTTATTGCG GATCTTTGGA GGTGAAGTAT ATACAGCATA CCGCGAGTTC
TCTTTTTCAA CCTTGGCAAA ATCAACCTTA ACACCTGAAT CTGAAATTGT AAGTAAAATA
AAATTTCTGG TGCAGAGCGG TATCATTGAT TTTATTGATG CCAGTGATGT TCCGCAGCTT
ACGTTTTTAT TGCCTCGGCA GGATGCACCA AAATTACAAT TAGATCTGCA ATGGCTGGAA
GACCGTAAAG ACCACGATCA GGAAAGCGCA GAAAACATGA TCGGCTTTCT GCATACACAA
GGCTGCCGGG CGCAATATGT ACTGGAATAT TTCGGTGAAT ACAATGCAGC ACCTTGTGGT
ATCTGCGACC GCTGTATCAG TAAGGCACGT AACAAAGAAT ATTATGACCA TACTGCAATG
GTAGTGCAGC AAACACTGCA AACGAAAAAC ATTCCGATCG AAGAACTTGA AAAAGAGTTT
GCTGGCTTAG ATAAAAATAT TGTGCTTGAC ATTATCCGTA CGTTGATGGA TACTTCTAAA
GTTAAGATCG ATGATACAGG TAGGTATTTG TGGGTGAAAA AGTAA
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| Protein sequence | MSASIHEILK TYWGHSNFRP LQEDIINSIL GGNDTVALLP TGGGKSICYQ VPALARDGLV
LVISPLIALM KDQVEQLRRR GIIATAIHSG LRKTEIDIAL DNCIYGNIKL LYVSPERLKS
DLFKERVEKM KIICIAIDEA HCISEWGHDF RPAYREIASI RTLLPEVPVI ALTATANEMV
LNDIMDQLAL QNPQIFTQSF TRKNLSYSCL YEENKEKRLV SMLQKIPGVC IVYANTRARV
VRIAEFLNRQ GIPTEFYHGG LDHKQRSIKQ DAFMKNTVRV MVATNAFGMG VDKPDVRLVV
HMDVPDSLEG YFQEAGRAGR DGNKAFAVLL HTKKDEEELL AKIPVAHPSP EVIRRMYQSL
ANYYQLAVGS GYMESYPFDL DEFCKKYNHN KLEAFYSLKR MEQHGIIQLS EAFYNPPKLK
VIVDHEHLYD ARLKMPKYDE FIKQLLRIFG GEVYTAYREF SFSTLAKSTL TPESEIVSKI
KFLVQSGIID FIDASDVPQL TFLLPRQDAP KLQLDLQWLE DRKDHDQESA ENMIGFLHTQ
GCRAQYVLEY FGEYNAAPCG ICDRCISKAR NKEYYDHTAM VVQQTLQTKN IPIEELEKEF
AGLDKNIVLD IIRTLMDTSK VKIDDTGRYL WVKK
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