Gene CHU_2231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2231 
Symbol 
ID4185791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2598024 
End bp2598956 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content41% 
IMG OID638072232 
Product2-hydroxyacid dehydrogenase 
Protein accessionYP_678836 
Protein GI110638627 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0397556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG TTTTCTTAGA CGCTTTAACA ATGGGGGACA TGCCTGAGCT GGAACGTTTC 
AACGGGTTTG GAGTCTATAC ACAATATGCT GAAACGGCTC CGGATGAAAG ACTGGAACGT
TGCTTAGAGG CAGACATCAT CATTACAAAC AAAGTAAAGA TCGATGCTGC ATTACTGGAG
CTTCTTCCAA ATCTTAAACT GATCTGTGTG GCTGCAACCG GAACAAATAA TATTGATCTG
GAGAAAGCAG CGGCATTGAA TATTCCGGTG AAGAATGTTA AAGGCTATTC AACCAACAGT
GTGGCGCAGC TTACTTTCGG TTTCATCATT GAATTGTATA ATCGTATTTC TTTTTACGAT
ACGTATGTAA AAGAAGAAAT GTATTCTTCT CAACAACTCT TTACGCATAT CGGTCCGGGT
TTGGAAGAAA TTGCTGGTAA AACAATCGGA ATTATCGGAA TGGGAGATAT TGGTAAAGCG
GTGGCAAAAA TTGCAGCAGC ATTTAATATG CAGGTGCAGT ATTATTCCAC CAGCGGAAAA
AATACAGATG CAGGTTATCC CTCTGTTTCC TTAGAGGTAC TTTTAAAGAC TTCTGACGTA
GTTAGCATTC ATGCGCCATT CAATCCGCAG ACAAGCCAGT TAATCGGCGC TAAACAGCTT
GCAATGATGA AATCAGATGC GGTATTGATT AATGTTGGAA GAGGAGGGAT TGTAGTAGAA
GCAGATTTGG TTCGGGCATT AGAAGAAAAA AAGATTTATG CTGCAGCGCT GGATGTATTT
GAACAGGAGC CGTTACCGCT TCATTCACCC TTATTGCAGC TGCAGGATCA TGGTCAGTTG
ATCTTAACAC CACACATTGC CTGGGCGAGT AAGCAGGCAC GTCTTACCTT ATTACAAGGC
ATTGAGCATA ACATCAAACA ATTTATTTCA TAA
 
Protein sequence
MNIVFLDALT MGDMPELERF NGFGVYTQYA ETAPDERLER CLEADIIITN KVKIDAALLE 
LLPNLKLICV AATGTNNIDL EKAAALNIPV KNVKGYSTNS VAQLTFGFII ELYNRISFYD
TYVKEEMYSS QQLFTHIGPG LEEIAGKTIG IIGMGDIGKA VAKIAAAFNM QVQYYSTSGK
NTDAGYPSVS LEVLLKTSDV VSIHAPFNPQ TSQLIGAKQL AMMKSDAVLI NVGRGGIVVE
ADLVRALEEK KIYAAALDVF EQEPLPLHSP LLQLQDHGQL ILTPHIAWAS KQARLTLLQG
IEHNIKQFIS