Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2229 |
Symbol | pgk |
ID | 4185789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2596259 |
End bp | 2597446 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638072230 |
Product | phosphoglycerate kinase |
Protein accession | YP_678834 |
Protein GI | 110638625 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAG TAGACAGTTT TAACTTTTCA GGTAAAAAAG CCCTGATACG CGTTGATTTT AACGTCCCTC TTAATAAGAG TTTTGAAATT ACAGATGATA CAAGATTAAA AGCAGTATTA CCTACTGTTT CGAAAGTATT AAAAGATGGT GGTTCAGCAA TTTTGATGTC ACACTTAGGT AGACCAAAAG GTGGACCGGA AGAAAAATAT TCTTTAAAAC ACATCCTTCC TTATCTGAAC AAAATGTTCG GACAGGAAGT ATTGTTTGCG GCGGATTGTA TCGGTGAAGA TGCAAAAGCA AAAGCAGCAG CATTAAAACC AGGTCAGGTA TTATTACTTG AGAACTTACG TTTCTATCCG GAAGAAGAAA AAGGCGATGT TGAATTCGCA AAAAAACTTT CTGTATTAGG TGATGTATGG GTGAATGATG CATTTGGTAC CGCACACAGA GCACATGCTT CAACAGCGGT AATCGGACAA TTCTTCAAAG ATAAAGTTTG CGGGTATGTA ATGCAGGCTG AACTTGACAA TGCAAATAAA TTATTAAAGC AAGGTGAAAA ACCAATCACA GCTGTTATGG GAGGTTCTAA AATCTCTGAT AAAATCATGG TGATTGAAAA CTTATTAGAT ACGGTTGACA ACCTGATAAT CGGTGGCGGT ATGTCTTATA CCTTCACAAA AGCATTAGGC GGAAAGATTG GCAAATCAAT CAACGAACCA GATAAATTAG AGCTTGCGCT TTCGTTAATT GAAAAAGCTA AAGCGAAAAA TGTTAAATTA TATTTACCGT TAGATAACGT TGTTGCAGAT GATTTCAGCA ACGATGCAAA CAAGCAGACA GTAAAAACGG GTGAAATTCC GGATGGCTGG GAAGGGCTGG ATATCGGACC TGAAACTGTT AAGTTATTCA GCGAAGTAGT TGCAAACTCT AAAACTGTTT TATGGAACGG ACCAATGGGC GTGTTTGAAT TTGCAAACTT TGCTACTGGT ACGATTGCTA TTGCTAAAGC AGTTAAAGAA GCAACACAAA AAGGAGCTTT CTCATTAATC GGTGGTGGCG ACTCAGCTGC TGCAATCAAC AATTTAGGTT TCGGTAACGA TGTATCTTAC GTTTCTACAG GCGGCGGTGC ATTACTTGAA TACTTCGAAG GCAAAACACT TCCGGGTGTG GCGGCGTTGG AGAAATAG
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Protein sequence | MKTVDSFNFS GKKALIRVDF NVPLNKSFEI TDDTRLKAVL PTVSKVLKDG GSAILMSHLG RPKGGPEEKY SLKHILPYLN KMFGQEVLFA ADCIGEDAKA KAAALKPGQV LLLENLRFYP EEEKGDVEFA KKLSVLGDVW VNDAFGTAHR AHASTAVIGQ FFKDKVCGYV MQAELDNANK LLKQGEKPIT AVMGGSKISD KIMVIENLLD TVDNLIIGGG MSYTFTKALG GKIGKSINEP DKLELALSLI EKAKAKNVKL YLPLDNVVAD DFSNDANKQT VKTGEIPDGW EGLDIGPETV KLFSEVVANS KTVLWNGPMG VFEFANFATG TIAIAKAVKE ATQKGAFSLI GGGDSAAAIN NLGFGNDVSY VSTGGGALLE YFEGKTLPGV AALEK
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