Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2206 |
Symbol | coxN |
ID | 4184170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2562575 |
End bp | 2564404 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638072207 |
Product | cytochrome c oxidase, subunit I |
Protein accession | YP_678811 |
Protein GI | 110638602 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000515262 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCTG TAGATATGTC ACATTCTGGT TCTTTATCTG ATGCGCATGC ACATGATGAG CACGATCACC ACGATCTGCC TTGGATTCGT AAGTATGTAT TCAGTGAAGA CCATAAGTAC ATTGCTAAAC AATATTTAGT TTCAGGTATT GTTTGGGCTG TTATTGGAGG TTTACTTTCA GTGTTGTTCC GTTTGCAATT AGGTTTTCCT GATGCAGATT TAACCTGGTT AAAACCATTG TTAGGGGAGT GGATTCAGAA TGGTAAATTA GATCCTGAAT TTTATCTTGC ATTAGTAACC ATGCATGGTA CAATCATGGT ATTCTTTGTA TTAACAGCGG GTCTGAGCGG TACGTTCAGT AACTTCCTGA TTCCGCTTCA GATTGGTGCA CGTGATATGG CATCTGGCTT TTTGAACATG CTGTCTTATT GGTTGTTCTT CCTTTCAAGT GTGATCATGA TGTTCTCTTT ATTTATTAAA ACAGGACCTG CATCAGGTGG CTGGGTAATT TATCCTCCAT TGAGTGCATT ACCACAGGCA GTAAACGGTT CAGGTTTAGG GATGACATTA TGGTTGGTTG CAATGGTATT CTTTATTGCA TCAACATTAT TGGGTGGTTT GAACTATGTA ACTACAGTAA TTAACCTCAG AACAAAAGGT ATGACGTTTA CACGTCTTCC GTTAACGATC TGGGCGTTCT TTATCACTGC AATCATTGGT TTATTATCCT TCCCGGTATT ATTCTCAGCA GCATTATTAT TAGTATTCGA CAGAAGTTTC GGAACAAGTT TCTTCTTATC TGAAATCTAC ATTGGTGGGG AAGCGTTACA CAACGAAGGT GGCAGCCCAA TCTTATTCCA GCACTTATTC TGGTTCTTAG GTCACCCGGA AGTATACATC GTATTATTAC CTGCATTGGG TGTAACATCT GAGATTGTTG CAACGAATTC ACGTAAGCCG ATCTTTGGTT ACAAAGCGAT GATCTTCTCT ATTGTTGCTA TTGCATTCTT ATCATTCATT GTATGGGCCC ACCATATGTT CGTAACAGGT ATGAATCCAT TCCTGGGTTC CATATTCATG TTCCTTACAT TGATCATTGC GGTACCATCT GCGGTGAAGG CTTTCAACTA CATTGCTACA TTATGGAGAG GTAACATCAT CTTTACACCT GCTATGTTGT TCTCTATAGG TCTGGTTTCT TTCTTCATAT CAGGTGGTTT AACAGGTATT GTATTAGGTA ACTCTGCAGC AGATATTCAA TTACACGATA CGTATTTCGT TGTAGCACAC TTTCACATTG TAATGGGTTC TGCATCCTTC TTTGGTATGC TTGCCGGTGT TTATCACTGG TATCCTAAAA TGTTCGGCCG TATGATGGAT GACCGTTTGG GTTATATCCA CTTCTGGTTA ACATTTATCG GTGTTTACCT GATCTTCTTC CCGATGCACT ACATTGGTAT CGCAGGTTTT CCAAGACGTT ATTATTCATG GACAGGTTTT GATGCGTTCA ATAGCTTTAC AGATCTGAAC GAATTGATCA GTATTGCAGC GATCGTAACA TTTGTAGCGC AATTTGTATT TATCTTCAAC TTCTTCTACA GCATGTTTAA AGGTAGAATT GCTACAATGA ACCCATGGAA ATCAAATACA TTAGAGTGGA CTACGCCAAT CAATCCGGGT CACGGCAACT GGCCGGGTGC TATTCCGCAC GTGTATCGTT GGCCATACGA TTACAGCAAG CCTGGTGCTG CTGATGACTT CATTCCGCAG ACAGTGCCAT TCTCCGAAAC TCCTGAGTCT AATTTACCAG GCGAAGTAGA CGAACATTAA
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Protein sequence | MSAVDMSHSG SLSDAHAHDE HDHHDLPWIR KYVFSEDHKY IAKQYLVSGI VWAVIGGLLS VLFRLQLGFP DADLTWLKPL LGEWIQNGKL DPEFYLALVT MHGTIMVFFV LTAGLSGTFS NFLIPLQIGA RDMASGFLNM LSYWLFFLSS VIMMFSLFIK TGPASGGWVI YPPLSALPQA VNGSGLGMTL WLVAMVFFIA STLLGGLNYV TTVINLRTKG MTFTRLPLTI WAFFITAIIG LLSFPVLFSA ALLLVFDRSF GTSFFLSEIY IGGEALHNEG GSPILFQHLF WFLGHPEVYI VLLPALGVTS EIVATNSRKP IFGYKAMIFS IVAIAFLSFI VWAHHMFVTG MNPFLGSIFM FLTLIIAVPS AVKAFNYIAT LWRGNIIFTP AMLFSIGLVS FFISGGLTGI VLGNSAADIQ LHDTYFVVAH FHIVMGSASF FGMLAGVYHW YPKMFGRMMD DRLGYIHFWL TFIGVYLIFF PMHYIGIAGF PRRYYSWTGF DAFNSFTDLN ELISIAAIVT FVAQFVFIFN FFYSMFKGRI ATMNPWKSNT LEWTTPINPG HGNWPGAIPH VYRWPYDYSK PGAADDFIPQ TVPFSETPES NLPGEVDEH
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