Gene CHU_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2201 
Symbol 
ID4184165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2558779 
End bp2559126 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content32% 
IMG OID638072202 
Producthypothetical protein 
Protein accessionYP_678806 
Protein GI110638597 
COG category[S] Function unknown 
COG ID[COG5605] Predicted small integral membrane protein 
TIGRFAM ID[TIGR02229] caa(3)-type oxidase, subunit IV 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.178155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.920784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACACG CATCACATTC TCACGGACAC TCTTCTGAAG TACAACCAAG AGATCCGGCA 
AAAATCAAAC ATTTACTTGT TGTTACAGCC ATCTTAGGTG TTTTAACGGC TATTGAATTC
GTTTTAGCTT TTACAATGGA AAGAGGGATT CTTCTTACAA CAATTTTCGT ATTAATGACA
TTGGTTAAAA CATTTTATAT TGTAGGTGAA TTCATGCACT TAAAATATGA AGTTAAGTTA
TTGATATGGG CAATTGTATT GCCTGTAATA TTCATCATCT GGTTAATTTT ATCTCAATTG
ATTGAAGCGA CTTATGTATT TCATTCAATT AAAGAAATCT TCGGTTAA
 
Protein sequence
MGHASHSHGH SSEVQPRDPA KIKHLLVVTA ILGVLTAIEF VLAFTMERGI LLTTIFVLMT 
LVKTFYIVGE FMHLKYEVKL LIWAIVLPVI FIIWLILSQL IEATYVFHSI KEIFG