Gene CHU_2196 details

Gene Information

• Locus tag: CHU_2196
• ID: 4184160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cytophaga hutchinsonii ATCC 33406
• Kingdom: Bacteria
• Replicon accession: NC_008255
• Strand: -
• Start bp: 2550063
• End bp: 2553515
• Gene Length: 3453 bp
• Protein Length: 1150 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638072197
• Product: hypothetical protein
• Protein accession: YP_678801
• Protein GI: 110638592

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 4
• Fosmid unclonability p-value: 0.0168047
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATAAGGG TTTATGTAAT TACACTTTTC TTTTTTTTTG TTATTGTGCA TAGCGGATAT 
GCGCAATATA GTAATCTGCG TTGCCGCTGG ATCAAACCTT CTGAAGATGG TATAAAACTG 
GATTCTCTTT CTGTCGTTCC GGGAAGTATT GAAATAAAAT CCCCCGGCGG TTACACAAGT 
ACATACAGTA TCGCATCCAA CCTTCTTACT CTATCACCAG CTCCTTTACC CGATTCGATA 
TTGGTCTGCT ACCGTGTTTA CCCGTTTGAT TTAGCAAAAC GTGTTTACAA AAGAGATCTT 
TCCATTTATG ATTCGCTTGG CGGTTACAGA GAAGTAATGC GGCTGCGCGG CTACAGCAAT 
ACGCCGCAGC AACGGGAGGA ATTATTTTCA ACGCCCGGCA TCAACAAAAC CGGTGTGATA 
TCGCGTGGGT TATCGGTTGG AAATAACCAG AGTGTTTTTG TAAACTCTGT GCTGAACCTG 
CAGCTGGATG GAAAGCTGAC AGAGAATTTA ACCTTGACTG CAGTAATTTC TGATCAGAAT 
ATTCCTTTTC AACCAGAAGG AAATACGCAG CAGCTGCAGC AATTTGACCG GGTGTATATT 
CAGTTAAAAA CACCCAAGAC TGCATTAACC GTAGGAGATA TTGTTTTGAA GGAACAGCAG 
TCTTATTTTT TACGCTACTA CCGTAACGTA CAAGGGGGGC ATATTATGCA TACCGAAAAA 
AAAGATTCCA CTTTTGAAAG TATTACACAG GGGGGGATCG GTGTTTCAAA AGGTAAATTT 
AATTCCATGC AGTTTTCACC GGGTACTGCA GACGTATTGC TGGAGGGAGT GCAAGGGCCT 
TACCGGTTAA GGGGGGCCAA CAATGAAGCC TATATTACGA TTATTGCAAA TTCAGAACGG 
GTATATTTTG ACGGCAGGCT GCTGACGCGA GGGTTTGATT ACGATTATGT GATCGATTAT 
AATACAGCAG AAATTACGCT AACTCCTTAT ATATTGGTTA CGCGATATAA CCGCATGCGC 
GTTGATTTTG AGTATACCGA TAAAAATTAT GCGCGTACAA ACACCGCCAT TTCGCAAAGC 
ATTAAAAACA AAAACGGTGT ATTTTCTTTT CAGTACTATA CAGAAAAAGA TAATCCGCGT 
AACCCCTTGT TGCTCGATCT TTCAAACGCT GATCAGATCT ATCTTTCAAC GATCGGGGAT 
GATCTCACAA AAGCTTATAT TGACGGCGCC GATTCTGTTG GATATACCCA GGGTGCTACC 
TTATATAGCA AAACAACAGT AGCAGGTGTG GATGTGTACG AGTATTCTAC GGACCCGGCT 
ACAGCTGTGT ATCAGGTAAA ATTTTCTCAG GTAGCACAAG GGCAGGGCAG TTACTCCCTG 
GATAATGCAA CGACTAATGC ACGGGTGTAC AAATATGTAG GTTTGCCGAA TGGCAATTAT 
TTACCAGTTC AGTACATTCC TACTCCGAAG AAAAAGCAAA TGATCCAGGG TTCTTTTTCG 
CAATACATCA ATAAACACGA ACAGGTTTTC AGTGACATTG CATTCAGTCA GAATGATATC 
AATTTATATT CTACGTTGGA CAAAGGGGAT GATGCAGGTA TGTCTGTACG TGCCGGTGTG 
AAAAGTAATA AACGAGACAT TGGCCTGTTA AATAAATACC TGTTAACATC AACGCTTGCA 
TATGAACTCA ATGAGAAAAA TTTCAGTGCG ATTGACCGCT TCCGTGCAGC AGATTTTGAA 
CGCTACTGGA ATGAAGATGT TACCAGGCTT GGTAACAATA ACATGGTAAC AGGGAATATT 
ACCTATGCTA AAAATGCAAG TGAGCTGATG AGTTATTCCC TGAATTACCG GAATAAGGAA 
TCCGATCTGA ATGGCGTACA GCATCAGGCA CAATTGTATC AGAAGATCGG AAATTTGTTT 
TTTAAAGGTG ATCTGTTTTT AAATAACAGC AATAACTACA GAGGTAAGGC AAACTGGGAG 
CGCTATAACG CACATGTATA TTATAAAACA ACTACCATCA CCCCAGGTTT TCAATACAAT 
ACAGAAAAGA ACCGCGTGGT CGATTCTTCC GGGAATTTAT TACAATCCTT AATGTATTTT 
GAAGAATTTA AATATTATGT TACCTCTAAC GATACTGCTA AGTTCAGATA TAAAATTGAT 
TACAGCAGCC GGAACGACAG GCAGTTATTT GGCAACGAAT TGCTTCCTTA TACAAAGGCA 
CAAACTGTAA GTTTTACAAG CGGTATTAAG TTCAGTTTAG ACCATCAGTT AAATTTTGTT 
ACTACCTACA GGTATCTGAA TTATGTTGGT CCGGTAGCAA CACCAGGCGA TGAAACGATC 
ATGTCGCGGG TAGACTGGAG TATCAGTGCA TTGAAACGGC ACATACGTTC AGAACTTACG 
GTTACAACAG GCGTGGGGCG GCAAGCCAGG CAGCAGTTTG TTTTTCAGCC GGTAGCAACC 
GGACTGGGAA CCTATGTTTG GCGGGATTAT AATAATGACC GCATTCAGCA GATCAATGAA 
TTTGTTACTA AAATTTATAA TGATACGGCT GAATTTATTA AGATTTACCT GCCTTCCAAC 
GATTATTATA AAGCGTATAC CAACCTGATC AACTACCGGC TGGATATGAG CATGCCAAGG 
AAATGGAAAT CTTCTAATTC CTTTATGTTA AAAACCTTAT CGAAACTTTC GAATACATCC 
TCCATTACAT TAAATAAAAA AACAACCGAT GATAATTTGT GGGAGCGGTT TAATCCTGCT 
TCCCCGAGTA CAAGCGATAC TTCCTTGCTG GCTTTTCAGC GCGTTATCCG GGCAATTGTA 
TTTTACAACC GGTCAAGCTC ACTTTTCGGG ATGGATCTTG CCTACACCGC AAATGACTCA 
AGGCAGTTTT TAACACAGGG GTTTGAAAAC CAATCCATCA ACGATCTTGT GTATGGGCTG 
CGTTCTACAT TTAAACGCAT GTATGCCTGG AAGATAAAAC TGACCACGGG ATTCAACAGC 
GTGAACTCCG ATTTCAATAC GGTTAGAAAC TATTATATAG AGTACAAAAA AGCAGATAAT 
GAGATTTCCT ATCAGCCGCG AACAAATCTG CGTTTTTCAA TTTTAAGCGG AGTGGCCTAC 
AAAATAAATA CGCTTGCGAT CGGGAACGGT GAAAATGCGA TCTTATATAA TATAGGTACG 
GAGCTGAAAC TGAATAAACT TTCCAAACGC ACGTTTACCA CAACCATTAA ATATATTCGC 
ATCAATTCCA GGTTGAACGG TACGCAGGAG AATAGCCCCA TTGCCTACGA AATGCAGGAA 
GCTTTGCTGA GCGGAAATAA CATGACATGG AATGTTGTCT GGCAGGAGCG TTTGACCAAT 
GGGTTACAGA TATCGTTTTC GTATGAAGGC AGAAAATCGG AATCGGTTAA AACTATTCAT 
ACAGGCAGGA TGCAGTTGAG CGCGTTGTTT TAG 

 

Protein sequence

MIRVYVITLF FFFVIVHSGY AQYSNLRCRW IKPSEDGIKL DSLSVVPGSI EIKSPGGYTS 
TYSIASNLLT LSPAPLPDSI LVCYRVYPFD LAKRVYKRDL SIYDSLGGYR EVMRLRGYSN 
TPQQREELFS TPGINKTGVI SRGLSVGNNQ SVFVNSVLNL QLDGKLTENL TLTAVISDQN 
IPFQPEGNTQ QLQQFDRVYI QLKTPKTALT VGDIVLKEQQ SYFLRYYRNV QGGHIMHTEK 
KDSTFESITQ GGIGVSKGKF NSMQFSPGTA DVLLEGVQGP YRLRGANNEA YITIIANSER 
VYFDGRLLTR GFDYDYVIDY NTAEITLTPY ILVTRYNRMR VDFEYTDKNY ARTNTAISQS 
IKNKNGVFSF QYYTEKDNPR NPLLLDLSNA DQIYLSTIGD DLTKAYIDGA DSVGYTQGAT 
LYSKTTVAGV DVYEYSTDPA TAVYQVKFSQ VAQGQGSYSL DNATTNARVY KYVGLPNGNY 
LPVQYIPTPK KKQMIQGSFS QYINKHEQVF SDIAFSQNDI NLYSTLDKGD DAGMSVRAGV 
KSNKRDIGLL NKYLLTSTLA YELNEKNFSA IDRFRAADFE RYWNEDVTRL GNNNMVTGNI 
TYAKNASELM SYSLNYRNKE SDLNGVQHQA QLYQKIGNLF FKGDLFLNNS NNYRGKANWE 
RYNAHVYYKT TTITPGFQYN TEKNRVVDSS GNLLQSLMYF EEFKYYVTSN DTAKFRYKID 
YSSRNDRQLF GNELLPYTKA QTVSFTSGIK FSLDHQLNFV TTYRYLNYVG PVATPGDETI 
MSRVDWSISA LKRHIRSELT VTTGVGRQAR QQFVFQPVAT GLGTYVWRDY NNDRIQQINE 
FVTKIYNDTA EFIKIYLPSN DYYKAYTNLI NYRLDMSMPR KWKSSNSFML KTLSKLSNTS 
SITLNKKTTD DNLWERFNPA SPSTSDTSLL AFQRVIRAIV FYNRSSSLFG MDLAYTANDS 
RQFLTQGFEN QSINDLVYGL RSTFKRMYAW KIKLTTGFNS VNSDFNTVRN YYIEYKKADN 
EISYQPRTNL RFSILSGVAY KINTLAIGNG ENAILYNIGT ELKLNKLSKR TFTTTIKYIR 
INSRLNGTQE NSPIAYEMQE ALLSGNNMTW NVVWQERLTN GLQISFSYEG RKSESVKTIH 
TGRMQLSALF