Gene CHU_2195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2195 
Symbol 
ID4184159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2549136 
End bp2549882 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content40% 
IMG OID638072196 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_678800 
Protein GI110638591 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00836348 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATTGAGT GCAAAAACAT TAATAAGTCC TTTAACGGTA AACAGATTTT AAAAAATGTA 
TCGGCCCAAT TTGAAAAAGG AAAAACAAAC CTGATCATTG GAGCCAGCGG TACAGGAAAA
AGTGTGTTAT TAAAAACACT GGTGGGGCTG GTTCACCCCG ATTCAGGTGC TGTTTTATAT
GATGAACGCG ATTTTACGCA GGCGAATAAA GATGAAAAAC AAGTGATCCG CAGAGAAATC
GGCATGCTTT TTCAGGGCGG CGCCCTGTTT GATTCTAAAA CAGTAGAGCA AAACGTGATG
TTCCCCTTAG ACATGCTCAG TAATATGTCT AAATCTGAAA AAACAGATCG GGTCAATTTC
TGTCTGCAAC GTGTAGGCTT AGATCAGGCA GCAAAATTAA TGCCTTCGGA AATAAGCGGC
GGTATGGCAA AACGGGTGGG TATTGCCCGT GCAATTGTAC TGAATTCAAA ATACCTGTAT
TGCGATGAAC CCAATTCAGG CTTAGATCCT CAAACCTCAA TCCGGATCGA TAATCTGATT
CAGGAAATTA CACATGAATA TGATATCACT ACCGTGGTAG TAACGCACGA TATGAACTCT
ATGCTTGAGA TCGGTGAAAA CATCATTTTT ATGTTTAAAG GCGAAAAGAT CTGGGAAGGA
ACAAAAGACA ATATCCTTGA AACGGATGTA AAAGATCTGC AGGATTTTAT CTTTGCCAGT
AAGCTGATCC GGGATATGAA GAATTAA
 
Protein sequence
MIECKNINKS FNGKQILKNV SAQFEKGKTN LIIGASGTGK SVLLKTLVGL VHPDSGAVLY 
DERDFTQANK DEKQVIRREI GMLFQGGALF DSKTVEQNVM FPLDMLSNMS KSEKTDRVNF
CLQRVGLDQA AKLMPSEISG GMAKRVGIAR AIVLNSKYLY CDEPNSGLDP QTSIRIDNLI
QEITHEYDIT TVVVTHDMNS MLEIGENIIF MFKGEKIWEG TKDNILETDV KDLQDFIFAS
KLIRDMKN