Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2195 |
Symbol | |
ID | 4184159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2549136 |
End bp | 2549882 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638072196 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_678800 |
Protein GI | 110638591 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00836348 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATTGAGT GCAAAAACAT TAATAAGTCC TTTAACGGTA AACAGATTTT AAAAAATGTA TCGGCCCAAT TTGAAAAAGG AAAAACAAAC CTGATCATTG GAGCCAGCGG TACAGGAAAA AGTGTGTTAT TAAAAACACT GGTGGGGCTG GTTCACCCCG ATTCAGGTGC TGTTTTATAT GATGAACGCG ATTTTACGCA GGCGAATAAA GATGAAAAAC AAGTGATCCG CAGAGAAATC GGCATGCTTT TTCAGGGCGG CGCCCTGTTT GATTCTAAAA CAGTAGAGCA AAACGTGATG TTCCCCTTAG ACATGCTCAG TAATATGTCT AAATCTGAAA AAACAGATCG GGTCAATTTC TGTCTGCAAC GTGTAGGCTT AGATCAGGCA GCAAAATTAA TGCCTTCGGA AATAAGCGGC GGTATGGCAA AACGGGTGGG TATTGCCCGT GCAATTGTAC TGAATTCAAA ATACCTGTAT TGCGATGAAC CCAATTCAGG CTTAGATCCT CAAACCTCAA TCCGGATCGA TAATCTGATT CAGGAAATTA CACATGAATA TGATATCACT ACCGTGGTAG TAACGCACGA TATGAACTCT ATGCTTGAGA TCGGTGAAAA CATCATTTTT ATGTTTAAAG GCGAAAAGAT CTGGGAAGGA ACAAAAGACA ATATCCTTGA AACGGATGTA AAAGATCTGC AGGATTTTAT CTTTGCCAGT AAGCTGATCC GGGATATGAA GAATTAA
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Protein sequence | MIECKNINKS FNGKQILKNV SAQFEKGKTN LIIGASGTGK SVLLKTLVGL VHPDSGAVLY DERDFTQANK DEKQVIRREI GMLFQGGALF DSKTVEQNVM FPLDMLSNMS KSEKTDRVNF CLQRVGLDQA AKLMPSEISG GMAKRVGIAR AIVLNSKYLY CDEPNSGLDP QTSIRIDNLI QEITHEYDIT TVVVTHDMNS MLEIGENIIF MFKGEKIWEG TKDNILETDV KDLQDFIFAS KLIRDMKN
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