Gene CHU_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2187 
Symbol 
ID4183936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2542717 
End bp2543286 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content34% 
IMG OID638072188 
Producthypothetical protein 
Protein accessionYP_678792 
Protein GI110638583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.619306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0970629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC ACGTTTTATT GATAAAAGAG GTACTTGTAT TAAATTCTGT GAATAGAATA 
ATTATGAATC GATTAGGTAA AATTGTATTT GGGTTAGGTA TTGCTGTTTG TTTATTTTCA
GCTACCAACA GCATTGCTCA GGTAAAAACA CACAGTTCAT TGAGAGCTGA AAACCTGGAG
GTTATTCTTG TAAAAGATAT TCAGCATATT TCAGATACAA CACATCATAC ACATGCACAT
GATCCGCACA AGTCGAGCTA TAAAATTTTG CATGTTAATT TTATGCTGGT AAGTTCAGAT
CCATCGGTTA CCGGATACAA ATCTGTTATG ATGCGTTTAA TCGATCCGCA TGGCGTAGAT
ATTTATGATC CGGCAGCGGG CGGCGGCTTG TTTAATTTAA ATGGCAAAGA AACTCCCTAT
ACATTTAAAG TAAGTACAAA ATTAGATGGT CAGCCATTAA AGATTGATTT CTTATACAAT
CACCCCAAAC ATTTCAGACA TGGGTTACAC ATTATTGAGT TATATGTGGA TGGGCTAAAA
ATAGGTGAAG AACATTTTGT GATAAAATAA
 
Protein sequence
MKKHVLLIKE VLVLNSVNRI IMNRLGKIVF GLGIAVCLFS ATNSIAQVKT HSSLRAENLE 
VILVKDIQHI SDTTHHTHAH DPHKSSYKIL HVNFMLVSSD PSVTGYKSVM MRLIDPHGVD
IYDPAAGGGL FNLNGKETPY TFKVSTKLDG QPLKIDFLYN HPKHFRHGLH IIELYVDGLK
IGEEHFVIK