| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2180 |
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| Symbol | dppC |
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| ID | 4183929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2534839 |
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| End bp | 2536077 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638072181 |
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| Product | oligopeptide ABC transporter, permease |
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| Protein accession | YP_678785 |
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| Protein GI | 110638576 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0605837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.552167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAAAGCA AAGACGTACA TTCTCCCTCA TACTATATAA AAAAACGGCT GTATAATAAT
AAACCAGCAA TGTTTGGGTT GTTTTTTATT ATCGTAGCAC ATATTATAGC CATACTGGGT
TATTCTATCA TGCCCGATAA TACACCTAAT GCAGATGATG GTGCAAATCT TATCAAGAAA
CAGGCTCCGG GTTTTTCAGC TAAATTTATA AAGAAGCATA AAAACAGAGT GGTAGAGGAC
GTCAACTTTT TTACCATGAT GATTGAGGGG CGGGAAAATC CCTATACGAT TGAACCTGTT
GATTCTTTTT ATTTCAAAGG AGATTCCATT TACTACAGAG AATTTAACGA GCGTGTCTGG
GAAAGAGAAC TTACATTAAG TTATATCGAT GTATGGTATG CAGGCCCAAC GTATAAATTA
TTTAAAGATT CATCTGCCAA TCATAGATTA ACAGCGGATT CTTCTTTTTA TGTTGATGCC
AATGAAGTTG TTCATGGCTT CTCTAAAAAA AGTCTCAATG AAACATTTCT AAAAAAGAAT
GTTGAGTCGC GTACCTACAT GTTAGGCACA GATAAACGCG GCAGAGATAT GCTTAGCCGG
TTACTGTTCG GTACACGGAT ATCCTTATCT ATTGGTTTTA TATCTGTAAT CATTTCATTG
GTTGTAGGGA TCACATTTGG TGCTATCGGC GGTTTTTTCG GCGGCCTGGT TGATCGTACG
CTGATGTGGT TTTTAACGGT TACGTGGTCC ATTCCGGGTA TCATGCTGGT AATCGCAATC
AGCCTTGCCC TACAAAGCAA AGGTATCTGG GTAGCCTTTG TGGCAGTTGG TTTAACCATG
TGGGTTGAGG TGGCGCGTGT TGTACGTGGT CAGATCCTGG CTATCAAAGA AAAACAATTT
GTTGAAGCAG CCAGAGCCTT AGGGATCGGA AGCTGGAGAA TTATTTTCTA TCATATTCTT
CCCAACATTG TGGGGCCGAT GATTGTTATT GCTACATCCA ATTTTGCTTC CGCAATCCTG
ATTGAGTCTG GTTTAAGTTT CCTTGGTTTA GGTGTACAGC CGCCAATGCC TTCCTGGGGT
ATGATGGTTA GCGAAGGCTA TCAATCGAAC TGGAGTGATG GTGGCTGGTA TCTGGTGTTC
TTCCCAAGTA TTTGTATCAG TATGCTGGTA TTAGCCTTTA ATTTATTCGG TAATGGTTTA
AGGGATGCGT ATGATCCCCA AACAGCAACA AAATGGTAG
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| Protein sequence | MESKDVHSPS YYIKKRLYNN KPAMFGLFFI IVAHIIAILG YSIMPDNTPN ADDGANLIKK
QAPGFSAKFI KKHKNRVVED VNFFTMMIEG RENPYTIEPV DSFYFKGDSI YYREFNERVW
ERELTLSYID VWYAGPTYKL FKDSSANHRL TADSSFYVDA NEVVHGFSKK SLNETFLKKN
VESRTYMLGT DKRGRDMLSR LLFGTRISLS IGFISVIISL VVGITFGAIG GFFGGLVDRT
LMWFLTVTWS IPGIMLVIAI SLALQSKGIW VAFVAVGLTM WVEVARVVRG QILAIKEKQF
VEAARALGIG SWRIIFYHIL PNIVGPMIVI ATSNFASAIL IESGLSFLGL GVQPPMPSWG
MMVSEGYQSN WSDGGWYLVF FPSICISMLV LAFNLFGNGL RDAYDPQTAT KW
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