| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2177 |
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| Symbol | |
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| ID | 4183926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2531215 |
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| End bp | 2532702 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638072178 |
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| Product | EXOQ family/lipid A core O-antigen ligase |
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| Protein accession | YP_678782 |
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| Protein GI | 110638573 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.42634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.835874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGTAA AAAAATATAT TAAAAACTAC CAGATCGTTG GGGAGCAATA CCGGGTAATC
CTTCTTTTTA CTTTTTGCAG TCTGATCGGA CTTTCGCAGG ATAGTATAGG AATTGCACTG
CTGCCGGTTG CATTATTAAT AAGCGCTTTT ATATTCAGTT ACCCTGCAGC AGGTTTATAT
ATCACAGCAG CGCTACTACC CTTTTCCAGA AATATCGGGT TTGATTTTAT TGGCGTAACG
GTTAATACAC CTTTAGAACC ATTGTTATTA GTTGTTGCAG GTACTACGCT GTTCAACTTC
ATGTTTAATG GTATAGATAA GGCAATGCTT TTCCATCCGT TAACTAAACT TGTTATAGTG
TTTATCAGCT TGATTTTTGT GAGCTGCTGT TTTTCAACCG AACCGTTAAT TTCATTCCGG
ATTGCGGCAC AAACAATTAT ATACATTATT GCGTCTTATT TTGGGATTCT GTACTTCAGC
CAATCAGACC CAAAACTTCC CTATCACTTT TTACTGACTA GTTTATTTTC ATTTTCTGTA
TTGGCGTTAA TTAATTTTAT CAGACACAGT ACCTTCGGTT TTTCACGTAC CGTAGCATGG
AACATTCCTA ATCCGTATTA TACCGATCAT ACAATTTATT CTACTATGGC AGCCTTTATG
ATTCCGCTTG CCTTTACCGC CATGCTGTGG TATTATAAAA AATCGTTGTG GAAATTCAAT
GTATTTACCT GCTTGTTTTT ATTAAGCTCT TCTGCATTGA TCTTATCTTA CAGCCGTGCT
GCCATGATGG GCGTAGCAGG CGCGTTGTGT TTATTTATCG TTTGGCGGTA TAAGATCAGA
TGGAGCTATA TCGGCATTGC CGCACTTATA GTAGCAGTAT ACATATTCTC TGCACGGGAT
CAGTTTTACA TGCAGATGAA AAGAAACAAT GCAGATTCAA AAACTAAAAA AACAAGTGTT
GAGGACCAGT TCAAATCAAT CACCAACATG AATACGGATG TTTCTAATAT GGAACGCCTC
AATCGCTGGA GTTCGGCCAT CCGTATGATT AAAGACAAAC CTTTTCTGGG TTTTGGTTAC
GGCATGTACC AACATAAGTA TTTTCCCTAT CAAAAAGCTA ATGAAATGAC GTATATTAGT
ATCCACAATT CACAACCTAA ATATAAAAGC GGAACCGGTG GAACAACCCA CTCTGAGTAT
TTATTAATAT CCTCAGAAAA TGGTATCATT ACAGGTGTGG TTTATATAGC GTTATTAGTA
ATGAGCCTGT ATACCGTTTC AAAATTGGTG AATACCCTGA CACCTGCTGA TGTTAATTAT
TATATCGTGA TAGGATTAGG CATGAGTATT ACAACCTATC TGGTGCATAG TTTCTTTAAT
AATTTTCTTG ATACATCTAA GATATGTACT ATCTTCTTCG GAATGCTGGC CTGCTTGGTA
ACAATTGATC TTTCAAATAA AACAACTTAT ACTACCGTAC AACAATGA
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| Protein sequence | MSVKKYIKNY QIVGEQYRVI LLFTFCSLIG LSQDSIGIAL LPVALLISAF IFSYPAAGLY
ITAALLPFSR NIGFDFIGVT VNTPLEPLLL VVAGTTLFNF MFNGIDKAML FHPLTKLVIV
FISLIFVSCC FSTEPLISFR IAAQTIIYII ASYFGILYFS QSDPKLPYHF LLTSLFSFSV
LALINFIRHS TFGFSRTVAW NIPNPYYTDH TIYSTMAAFM IPLAFTAMLW YYKKSLWKFN
VFTCLFLLSS SALILSYSRA AMMGVAGALC LFIVWRYKIR WSYIGIAALI VAVYIFSARD
QFYMQMKRNN ADSKTKKTSV EDQFKSITNM NTDVSNMERL NRWSSAIRMI KDKPFLGFGY
GMYQHKYFPY QKANEMTYIS IHNSQPKYKS GTGGTTHSEY LLISSENGII TGVVYIALLV
MSLYTVSKLV NTLTPADVNY YIVIGLGMSI TTYLVHSFFN NFLDTSKICT IFFGMLACLV
TIDLSNKTTY TTVQQ
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