Gene CHU_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2161 
Symbol 
ID4184723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2510852 
End bp2511241 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content40% 
IMG OID638072161 
Producthypothetical protein 
Protein accessionYP_678766 
Protein GI110638557 
COG category[S] Function unknown 
COG ID[COG2149] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.274618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA ATAAAAATAA AGCCAGTGCC GCTGATTATT TAGCAAACGA ACGTACCTTC 
TTAGCCTGGG TACGTACGGG TATGGGGATC ATGGCTTTTG GTTTTGTGGT TGTTAAGTTT
TCATTGTTTG TAAAACAGAT TTCTTTTATT CTGAATGGAG AAGATGCGCC TGAGTTACCG
GCAGATCATG GACATTCTTC TGCTTTGGTA GGAATTATAC TGGTAGGCCT TGGTGTAGTT
GCTATTCTGT TTTCGTATAT CCGTTACCGT TCTACCAATA AGCAATTGGA AACAGGCAAC
TATACACATT CTTCTTTGTA TATCAGTCTG CTTACAGCAG CAATTCTTCT GATCAGTGTG
TTTCTGGTAT ATTACCTCAT CCGAAGCTGA
 
Protein sequence
MEENKNKASA ADYLANERTF LAWVRTGMGI MAFGFVVVKF SLFVKQISFI LNGEDAPELP 
ADHGHSSALV GIILVGLGVV AILFSYIRYR STNKQLETGN YTHSSLYISL LTAAILLISV
FLVYYLIRS