Gene CHU_2147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2147 
Symbol 
ID4187071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2494451 
End bp2495998 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content46% 
IMG OID638072147 
Producthypothetical protein 
Protein accessionYP_678752 
Protein GI110638543 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.354492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCATT TACACCGCAA GCAGATCACA AATACATTTA CGGAGACATT TCCCGGCGAT 
CTGTCTATGA ATAACACAAC CCGTCAAACG CCGGGTGTAT TGTATTGCAG CGTGCTTCCA
ACACCTGTGC ATCATCCGCA GCTGCTTGCC TGGTCTGCTG ATGTTGCAGA AATGCTGGGC
CTTGAATCGC CCGTACCGGA AGATGTACTC ATCCTGGGCG GTAATACTGT AAATCCGACC
ATGAAGCCGT ATGCATCGTG TTATGCCGGA CATCAGTTTG GAAACTGGGC GGGGCAATTG
GGTGATGGCA GAGCAATTTC ACTGGGGTTT TGCAGCGGAA AAGACAGCAT GGAGTATGAA
CTGCAATTAA AAGGAGCTGG GCCAACACCT TACTCACGGA ATTCAGATGG AAGAGCCGTC
TTACGTTCTT CGCTCCGGGA ATATTTAATG AGCGAAGCCA TGCATTACCT GGGCGTACCC
ACGACACGTG CGCTTAGTCT TGTATCTACA GGGGATGCGG TGTTGCGGGA TATGTTCTAC
AACGGACATG CAGCATATGA ACCGGGTGCG GTTGTACTGC GTGTTGCGCC GTCTTTTATA
CGGTTCGGTA ATTTTGAAAT ATTGGCAGAA CGCAATAACC GTGATTTGAG TCAGCAGCTT
TGTGATTGGG TTATAACACG TTATTATCCG GAAATACGAG GCGAAGATCG CGTTGTACAG
TTGTTTCAGG CTGTAGCAGA GCGCACGGCC GATATGGTGG TGCAATGGCT GCGTGTTGGA
TTTGTACATG GTGTAATGAA TACCGATAAT ATGTCAATTC TTGGTGTAAC CATTGATTAC
GGGCCATATT CTTTTGTAGA TGAATACGAC GCACGTTTTA CCCCGAATAC AACAGACTTG
CCGGGCAGAA GATATGCCTT CGGAAACCAG GCTGCTGTTG CTTACTGGAA TTTGGGGCGC
CTTGCCAACG CGCTCGCTTT TTTAGTACCG GAAACAGATA AGCTTGTTGC TGTATTAAAA
AATTATCAGG ACGTATACGA AACCAAATAC TATACCATGA TGGCAAACAA ACTGGGTTTT
GATGCGTTAC GTGAAGATGA CCGCTTGCTG ATTGATTCGT TTGAAGAAAT GCTGCGCACC
GTAAAACCGG ACATGACCAT GTTTTATCAG CTGCTCATTG ATCTGCCTGC AGATCCGGGA
ACAGCAGCCG ATGTGAAACA GTTCTTTCAA TCCTGTTTTT ATACAGAAGC CGATGAAGCA
CTATTGCATA CATGTATTGC TGCGTATAGT AAGAGAATTA AAACCAATAC CTGTTCAAAA
GAAGTTTCCG CGGAGAAAAT GCGTGCAGCA AATCCACGGT TTGTGCTGAG AAATTATATC
TTGCATGAAG CGATTGAGAA ACTGGAAAAA GGAGATGATG CTCTATTGAA AAAATTAGAG
GAATACATCA AGCAGCCATA TTCAAAAAAT GCAGATGAAT ATTTTATTAA ACGTCCGGAT
TGGGCAGCTC AAAAAGCCGG CTGTTCCATG TTATCGTGCA GTTCATAA
 
Protein sequence
MEHLHRKQIT NTFTETFPGD LSMNNTTRQT PGVLYCSVLP TPVHHPQLLA WSADVAEMLG 
LESPVPEDVL ILGGNTVNPT MKPYASCYAG HQFGNWAGQL GDGRAISLGF CSGKDSMEYE
LQLKGAGPTP YSRNSDGRAV LRSSLREYLM SEAMHYLGVP TTRALSLVST GDAVLRDMFY
NGHAAYEPGA VVLRVAPSFI RFGNFEILAE RNNRDLSQQL CDWVITRYYP EIRGEDRVVQ
LFQAVAERTA DMVVQWLRVG FVHGVMNTDN MSILGVTIDY GPYSFVDEYD ARFTPNTTDL
PGRRYAFGNQ AAVAYWNLGR LANALAFLVP ETDKLVAVLK NYQDVYETKY YTMMANKLGF
DALREDDRLL IDSFEEMLRT VKPDMTMFYQ LLIDLPADPG TAADVKQFFQ SCFYTEADEA
LLHTCIAAYS KRIKTNTCSK EVSAEKMRAA NPRFVLRNYI LHEAIEKLEK GDDALLKKLE
EYIKQPYSKN ADEYFIKRPD WAAQKAGCSM LSCSS