Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2144 |
Symbol | |
ID | 4187068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2491775 |
End bp | 2492524 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638072144 |
Product | hypothetical protein |
Protein accession | YP_678749 |
Protein GI | 110638540 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAA CGATGATGCA ATGCATGCCG GCTTTTGTGA TTCATTTTTT TGCAGAAGCA TACATTGTCA GTAATTTTTG TAATTTTAGT ATCAAGGAAG AATTTTCAAT ATACAACCAG ATGAAAGCTC GTAAAATCTT CATTGTATTG ATTTTAACAT ATACATGTTT TTTTAAAAGT GCAGCTCAAA CTGACCTGCC GCCTAAAAGG TATTTAGTTG AAGGCTCCGC GATGACTGGC TGGCTCTTTG CCGGTAAAGC ATCTGCAGCC AAGATCATTA ATGCGCCTGT ATACAATCTG TCTGTAGGCT ACATCCGCAA TGAAATGGCC ATGTATGAAC TGAATATAAA TACGTTATTT TCTCAGACGC GTTTCCCGAA CTGGAATAAT ACAGGCGATA CCACTACTAC GTATTCACAG ACATACATTA TGCTTGGTAT TGTGCGCACG TTTAATACTG AAATGCCGAA ATTTTCTCCC TACGTTTCAA CCATGATCGG TATTTTAAGT CAGCGCATAC ATGCACCAAA TGTTTCTCCG CAGACACAAA TAGCAGCGGG CCTTTCCGGT GGTATTAAGT ATTTTATAAA AGAAAATCTG GGAATAAAAT TACAGGCACG TATCCAGGCT CCCTTAAGCG GTATTGGGTT AGGTGTGGGC ATTGGTTTTG GCGGCCCTTC GGTTGGAGTA GGAAGCTATT CAAATAATAT TCAGTTTGAC TTATCAGGCG GTGCCTGTTT CCGTTTTTAA
|
Protein sequence | MKKTMMQCMP AFVIHFFAEA YIVSNFCNFS IKEEFSIYNQ MKARKIFIVL ILTYTCFFKS AAQTDLPPKR YLVEGSAMTG WLFAGKASAA KIINAPVYNL SVGYIRNEMA MYELNINTLF SQTRFPNWNN TGDTTTTYSQ TYIMLGIVRT FNTEMPKFSP YVSTMIGILS QRIHAPNVSP QTQIAAGLSG GIKYFIKENL GIKLQARIQA PLSGIGLGVG IGFGGPSVGV GSYSNNIQFD LSGGACFRF
|
| |