Gene CHU_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2142 
Symbol 
ID4187066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2489338 
End bp2490657 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content45% 
IMG OID638072142 
Productserine/threonine protein kinase 
Protein accessionYP_678747 
Protein GI110638538 
COG category[S] Function unknown 
COG ID[COG4886] Leucine-rich repeat (LRR) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.733899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACGC TGGAACAGTT ACGGGCAGGA GCATTGACAG GCATACAGGC GTTAAAATTG 
TCGGAAAATT TAACAGAAGT TCCGGCAGAA GTTTTTCAGC TCGCCGATAC ATTGGAAATA
CTGGATCTGT CAGGTAACCG CTTACATTCC TTACCGCAGG AAATGGCTTG CTTAACCAGG
CTCCGGATTT TATTTTTATC GGATAATGAT TTTACTATTT TTCCTGAAGT ACTAAAAGAG
CTGAAGCAGC TTGATATGTT AGGTATAAAG GCAAATAACA TACAGGTGAT CGCAGAAGAT
GCTATTCCGG TATCGCTGCG CTGGCTGATC TTAACAGATA ATTGTATTGA AGCGTTACCG
GTAAGTATCG GCCGTTGTAC AAAACTTCAG AAAGTCATGC TGGCGGGAAA TCAACTTTCA
GGATTGCCCG ATGAGCTTGC AGCCTGCAGA AATATTGAGT TGCTGCGTAT CTCAGCAAAT
AATATGCATA CGTTTCCTGA AGTTGTAAAA CAGCTGCCGC GCCTGGCCTG GCTGGCGTAT
TCCAGTAATC CGTTTCAGGT AAACAGGTCT TCTTTCAATG CTTTGCCTGT TATTGCCTGG
GAAAACGTAG CGCTTATGGA ACAGCTTGGC GCAGGGGCTT CCGGTATTAT TTATAAAGCC
CGGTTGAATA CAGGTAAATC ACCAGAAGAT GTAGCCGTAA AAGTATTTAA GGGTGCTGTT
ACCAGCGACG GGCTGCCGGA AGATGAAATG ACTGCCTGTA TGCAGGCCGG TCGTAACAGT
CACCTGGTGT CTGTGTTGGG CGTGATCGGG GGGCATCCGG AAGGTATGCA CGGGTTGGTA
ATGGAACTGA TTCCTGCGGA ATATAAAAAC CTGGGCAGAC CGCCTTCCTT TGTTACCTGT
ACACGGGATA CCTTTGCTGC CGGTACCCGT TTTACCGCTC AACAGATGCT GCTTATACTG
AAAGGAGTGG CAGAAGCTGC CAAACAGCTG CACGATAACG GAATTATGCA CGGAGATTTA
TATGCGCATA ATACCCTGAT CAATGAAAAA TACCATAGCC TGTTTGGTGA TTTCGGTGCA
GCAACGCTGT ATGATAAGAA TAACCGGGAT GAAGCTTTTT TTCTGGAACG TCTGGATGTA
CGTGCTTTCG GCTGTTTAGC AGATGATTTG CTGCAATACA GCGTATGTAC CAAAGAAGAC
GAATGGTGTC TGGAAACACT CAAAAGGCTT TCTGCCGGAT GCATGAACGA AGAGCCTGAT
AAAAGACCGG CATTCAACAC AATTGTTTAC GAACTCCAAT TACTGCAAAA TACTCATTAA
 
Protein sequence
MHTLEQLRAG ALTGIQALKL SENLTEVPAE VFQLADTLEI LDLSGNRLHS LPQEMACLTR 
LRILFLSDND FTIFPEVLKE LKQLDMLGIK ANNIQVIAED AIPVSLRWLI LTDNCIEALP
VSIGRCTKLQ KVMLAGNQLS GLPDELAACR NIELLRISAN NMHTFPEVVK QLPRLAWLAY
SSNPFQVNRS SFNALPVIAW ENVALMEQLG AGASGIIYKA RLNTGKSPED VAVKVFKGAV
TSDGLPEDEM TACMQAGRNS HLVSVLGVIG GHPEGMHGLV MELIPAEYKN LGRPPSFVTC
TRDTFAAGTR FTAQQMLLIL KGVAEAAKQL HDNGIMHGDL YAHNTLINEK YHSLFGDFGA
ATLYDKNNRD EAFFLERLDV RAFGCLADDL LQYSVCTKED EWCLETLKRL SAGCMNEEPD
KRPAFNTIVY ELQLLQNTH