Gene CHU_2135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2135 
Symbol 
ID4187059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2479137 
End bp2480660 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content39% 
IMG OID638072135 
Producthypothetical protein 
Protein accessionYP_678740 
Protein GI110638531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACTA AAAAAACATG GTTATGGATT GTACTTGGCG TTGTTGCAGG CATTGCAGTA 
CTGTTCTATT TATTTTACAC AAAAAAAAGG GTTAACTGGG ACGAGCATTA TAAAACTTCC
TCGAAAGATC CGTATGGCTT ATATCTGATC AAAGAATTAA TTGCAGACAG ATATAAGGAT
GATATGAAGG ATATCAATAA ATCCTTAGAT GAAATTTTAC CTCTTGACGA TACCGTTAAA
AAGGGTACGA TTATTTATAT CGGCAACACC CTGAACTTAA CTGACCGGGA TACAAAATCA
TTCTATACCT TTATTGAAAA AGGAAACAAT GCCTTTGTTT CTATCAATCA ATTGCCTCAT
AGCATGCAGT ATTTATTATA TGCCGGCGGC ACGTTTACAT TTGATTCTGC AACCAGCACA
CTTATCTATC CGCAATCAAT TCCTTTTATG CCGGTTGAAA AATCAGACAT TGAAAAGGTA
GTTGACTCAC TTGCTACCTA TCCGGAAGGA GGCGACAGTC TGCCAGTCAT TCCTTATGAG
CAGGTAGAAG CATATGATGA AACAGACGAT TACGACGAAG ACGATGCAGC GCTTGAAAAT
AATACATTGA CAGACACTGT TCAGGCAGCC ACGGATACGG TATCCTATGA AATCCCTGAA
CTTAGCGGTG TAGCACCGGT GCACGTTCAA CAGGCCAAAA TTAAAACAAC ATTAAAACCA
CCCCTACCTG ACACCCATAC AACGTTTACC TTTGAGACCG TTAAGACATC CTTTTTCAGT
ATTGAGATGC CGTATAAATG GAGTCTTTTT GCGGCACAGG CAAATCTGCA TTACACGTGC
TCCAAACTTA CCAGTGTAAA TGATTCGATG TGCAATTTCA TTTCGATTCC TTATGGAAAA
GGAAAACTTT ACATACATAC GAGTCCGGTA TTATTTTCCA ATTTCCATCT AAAGGAAAAA
CAAGGATTTG CCTATGCAAA AAATATCTTA TCTGTGTTAT CAGAGGGGCC TGTCTATTGG
AACGAAATCA GTGCTTCACA GGGCTCTGCA AACAATGAGG GCATGCATAC ACCCAAAGTA
TATTTAAAGT ACATCCTTTC TTTCGATTCA CTTCGCTGGG CCTGGTACCT GTTATTAGCA
ACCACCTTTA TTTACATTGT ATTTACCAGC AAACGCAAAC AACGTATTAT TCCGGTTGTG
GAACCTATTG TAAATACAAG CCTTGAATAT GTACATACAA CAGGCAGATT ATACGCACAG
ATCGGAAATC ACCGCAAACT GGTTCAGTTA AACATGCGTT TGTTTTTATC CGGTATTCAG
CAAAAATATG CTGTGCATAT CAATCTTTCA GATCCGGTAT CTGCCGGATG GCTGGCAAAC
AAGTCAGGTA TCCCTGTTGA ACAATATGCA GAACTGCATA ACACCTATAA AAAATTAACC
GTACCCGGTC ACGATATTAA AACAACAGAA CTTCATACCT TCTATCAACA GATGCAATTC
ATTTACAAAA AAATTCAAAA CTAA
 
Protein sequence
MQTKKTWLWI VLGVVAGIAV LFYLFYTKKR VNWDEHYKTS SKDPYGLYLI KELIADRYKD 
DMKDINKSLD EILPLDDTVK KGTIIYIGNT LNLTDRDTKS FYTFIEKGNN AFVSINQLPH
SMQYLLYAGG TFTFDSATST LIYPQSIPFM PVEKSDIEKV VDSLATYPEG GDSLPVIPYE
QVEAYDETDD YDEDDAALEN NTLTDTVQAA TDTVSYEIPE LSGVAPVHVQ QAKIKTTLKP
PLPDTHTTFT FETVKTSFFS IEMPYKWSLF AAQANLHYTC SKLTSVNDSM CNFISIPYGK
GKLYIHTSPV LFSNFHLKEK QGFAYAKNIL SVLSEGPVYW NEISASQGSA NNEGMHTPKV
YLKYILSFDS LRWAWYLLLA TTFIYIVFTS KRKQRIIPVV EPIVNTSLEY VHTTGRLYAQ
IGNHRKLVQL NMRLFLSGIQ QKYAVHINLS DPVSAGWLAN KSGIPVEQYA ELHNTYKKLT
VPGHDIKTTE LHTFYQQMQF IYKKIQN