Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2135 |
Symbol | |
ID | 4187059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2479137 |
End bp | 2480660 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638072135 |
Product | hypothetical protein |
Protein accession | YP_678740 |
Protein GI | 110638531 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACTA AAAAAACATG GTTATGGATT GTACTTGGCG TTGTTGCAGG CATTGCAGTA CTGTTCTATT TATTTTACAC AAAAAAAAGG GTTAACTGGG ACGAGCATTA TAAAACTTCC TCGAAAGATC CGTATGGCTT ATATCTGATC AAAGAATTAA TTGCAGACAG ATATAAGGAT GATATGAAGG ATATCAATAA ATCCTTAGAT GAAATTTTAC CTCTTGACGA TACCGTTAAA AAGGGTACGA TTATTTATAT CGGCAACACC CTGAACTTAA CTGACCGGGA TACAAAATCA TTCTATACCT TTATTGAAAA AGGAAACAAT GCCTTTGTTT CTATCAATCA ATTGCCTCAT AGCATGCAGT ATTTATTATA TGCCGGCGGC ACGTTTACAT TTGATTCTGC AACCAGCACA CTTATCTATC CGCAATCAAT TCCTTTTATG CCGGTTGAAA AATCAGACAT TGAAAAGGTA GTTGACTCAC TTGCTACCTA TCCGGAAGGA GGCGACAGTC TGCCAGTCAT TCCTTATGAG CAGGTAGAAG CATATGATGA AACAGACGAT TACGACGAAG ACGATGCAGC GCTTGAAAAT AATACATTGA CAGACACTGT TCAGGCAGCC ACGGATACGG TATCCTATGA AATCCCTGAA CTTAGCGGTG TAGCACCGGT GCACGTTCAA CAGGCCAAAA TTAAAACAAC ATTAAAACCA CCCCTACCTG ACACCCATAC AACGTTTACC TTTGAGACCG TTAAGACATC CTTTTTCAGT ATTGAGATGC CGTATAAATG GAGTCTTTTT GCGGCACAGG CAAATCTGCA TTACACGTGC TCCAAACTTA CCAGTGTAAA TGATTCGATG TGCAATTTCA TTTCGATTCC TTATGGAAAA GGAAAACTTT ACATACATAC GAGTCCGGTA TTATTTTCCA ATTTCCATCT AAAGGAAAAA CAAGGATTTG CCTATGCAAA AAATATCTTA TCTGTGTTAT CAGAGGGGCC TGTCTATTGG AACGAAATCA GTGCTTCACA GGGCTCTGCA AACAATGAGG GCATGCATAC ACCCAAAGTA TATTTAAAGT ACATCCTTTC TTTCGATTCA CTTCGCTGGG CCTGGTACCT GTTATTAGCA ACCACCTTTA TTTACATTGT ATTTACCAGC AAACGCAAAC AACGTATTAT TCCGGTTGTG GAACCTATTG TAAATACAAG CCTTGAATAT GTACATACAA CAGGCAGATT ATACGCACAG ATCGGAAATC ACCGCAAACT GGTTCAGTTA AACATGCGTT TGTTTTTATC CGGTATTCAG CAAAAATATG CTGTGCATAT CAATCTTTCA GATCCGGTAT CTGCCGGATG GCTGGCAAAC AAGTCAGGTA TCCCTGTTGA ACAATATGCA GAACTGCATA ACACCTATAA AAAATTAACC GTACCCGGTC ACGATATTAA AACAACAGAA CTTCATACCT TCTATCAACA GATGCAATTC ATTTACAAAA AAATTCAAAA CTAA
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Protein sequence | MQTKKTWLWI VLGVVAGIAV LFYLFYTKKR VNWDEHYKTS SKDPYGLYLI KELIADRYKD DMKDINKSLD EILPLDDTVK KGTIIYIGNT LNLTDRDTKS FYTFIEKGNN AFVSINQLPH SMQYLLYAGG TFTFDSATST LIYPQSIPFM PVEKSDIEKV VDSLATYPEG GDSLPVIPYE QVEAYDETDD YDEDDAALEN NTLTDTVQAA TDTVSYEIPE LSGVAPVHVQ QAKIKTTLKP PLPDTHTTFT FETVKTSFFS IEMPYKWSLF AAQANLHYTC SKLTSVNDSM CNFISIPYGK GKLYIHTSPV LFSNFHLKEK QGFAYAKNIL SVLSEGPVYW NEISASQGSA NNEGMHTPKV YLKYILSFDS LRWAWYLLLA TTFIYIVFTS KRKQRIIPVV EPIVNTSLEY VHTTGRLYAQ IGNHRKLVQL NMRLFLSGIQ QKYAVHINLS DPVSAGWLAN KSGIPVEQYA ELHNTYKKLT VPGHDIKTTE LHTFYQQMQF IYKKIQN
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