Gene CHU_2132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2132 
Symbol 
ID4184617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2475791 
End bp2476507 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content43% 
IMG OID638072132 
Producthypothetical protein 
Protein accessionYP_678737 
Protein GI110638528 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACA TAGAGATACA AACCAGCCAA AATGTAGCAA TTGAGTATGA AGCCGCACCG 
TTACGCGATC GCATAATCGG CTGCCTGCTG GACATGCTTA TTCTGTCGGT AGGTGGCGGC
TTTATTTCCA TGGCCATATA CTCCGCAACG GGCAGCGGTA CACTGGCTTA TTGTTTTATA
GTTCCCGTAG TGGTTTTTTA TAGTCTTACG CTGGAAGTAT TTAATAATGG AAAGTCGCTG
GGTAAAATGA TGTTAGGTAC ACAGGTTGTA CGACTGGATG GGCAGGAAAC ACGGCTGAAT
GATTTTCTGA TCCGTTGGGC GTTCCGTTCG GTAGATATAC TATTAAGTAT GGGAAGCCTG
GCAACGATCA TGGTAACGAT TACAAAAAGG CATCAGCGCC TGGGTGATTT TGTAGCTAAT
ACGGTGGTAA TTAAAACTAA AGCAAGTTAT TTTATTACAC TGGAAAGTGT TTTGAAGAAA
AAAAGTGCTG AAGGCTATGT ACCTGTATAT CCGGATGTAA CCCGCTTCTC AGAAGAGCAG
ATGCTTGTAT TGAAAAATAC GATTGACCGC TCTGTATCAT ACCCGAACGA TGCCCATAAA
GAAGCAATCA TCCTGCTGAG CAAGCAGGTT GCAGCAAAAA TGAATATTGC CGTGCCGCAA
AAGAAACTGG AATTTCTGAA GCAGGTATTA AAAGATTACG TGATCCTTAC GCGATAA
 
Protein sequence
MSNIEIQTSQ NVAIEYEAAP LRDRIIGCLL DMLILSVGGG FISMAIYSAT GSGTLAYCFI 
VPVVVFYSLT LEVFNNGKSL GKMMLGTQVV RLDGQETRLN DFLIRWAFRS VDILLSMGSL
ATIMVTITKR HQRLGDFVAN TVVIKTKASY FITLESVLKK KSAEGYVPVY PDVTRFSEEQ
MLVLKNTIDR SVSYPNDAHK EAIILLSKQV AAKMNIAVPQ KKLEFLKQVL KDYVILTR