Gene CHU_2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2123 
Symbol 
ID4184608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2467952 
End bp2468692 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content42% 
IMG OID638072123 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_678728 
Protein GI110638519 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCGA ATTTAAAATA CGCATTGGTT ACAGGTGCTG CCAGAGGTAT TGGAAAAGCA 
ATTGCTGTAA AGCTGGCTTC AGACGGTTAT CATGTGCTGA TTAATTATAA ATCAAACGAT
GCTGAAGCTG AAAAGACAAA ATCGGCTATT GAAGAACAGG GCGGAGCTGC AACATTGATG
AAGTTTGATG TATCGGATCG CACGGAAGTA AATAACGTAT TAGCAGGCTG GCTGGAACAG
CATCCCGATT CTGTTATCGA AGTGCTTATT AATAATGCCG GTATCCGCAA CGATAATTTA
TTGATGTGGA TGGAACCGAA GGATTGGGAT GGCGTGATCG ATATCAACTT AACGGGTTTT
TATAATGTAA CCAAAACATT GATCAACCAG ATGCTGTTGA ATAGATATGG CCGCATTATA
AATATCGTTT CGCTATCAGG CCTAAAAGGT GTACCTGGGC AAATGAATTA CTCTGCCGCA
AAGGCTGGCG TAATAGGTGC TACAAAAGCT TTGGCACAGG AAGTTGGAAA GCGTGGAATC
ACTGTAAATG CCGTTGCTCC CGGTTATATA AAGACAGATA TGACGCAGGA TATAAATGAA
AAAGAAGCAA AAGCACAGAT ACCGGCAAAC CGTTTTGGCG AACCGGAAGA AGTAGCAGAG
CTTGTTTCAT TTCTGGCTTC TAAAAAAGCT TCGTACATAA GTGCCGAAGT AATTTCTATT
AATGGCGGAT TGTATTCCTG A
 
Protein sequence
MSANLKYALV TGAARGIGKA IAVKLASDGY HVLINYKSND AEAEKTKSAI EEQGGAATLM 
KFDVSDRTEV NNVLAGWLEQ HPDSVIEVLI NNAGIRNDNL LMWMEPKDWD GVIDINLTGF
YNVTKTLINQ MLLNRYGRII NIVSLSGLKG VPGQMNYSAA KAGVIGATKA LAQEVGKRGI
TVNAVAPGYI KTDMTQDINE KEAKAQIPAN RFGEPEEVAE LVSFLASKKA SYISAEVISI
NGGLYS