Gene CHU_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2109 
Symbol 
ID4186315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2457072 
End bp2458274 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content39% 
IMG OID638072109 
Productb-glycosyltransferase 
Protein accessionYP_678714 
Protein GI110638505 
COG category[M] Cell wall/membrane/envelope biogenesis
[S] Function unknown 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG3216] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0591091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCATA CTACCTTACA TCATAAATTT ATTCATCACG CCTGTTGTGT ATTGATTCCT 
ACGTACAACA ATGCAACAGC TATTGCAGCT GTTATTGAGG GGGTATTGGA ATATACGTCG
AATATTGTGA TTGTTAACGA CGGATCAACA GACAATACAC GCTCTATTTT AGAAAACTAC
CCGGATTTGC TTGTTGTAGA ACATGCGAAA AACAGCGGTA AAGGAATGGC GCTGCGTACG
GGTTTTAAAG CAGCATTTAA GCATGGCTAT AAATATGCCA TTTCCATTGA TTCGGATGGA
CAACATTATC CGGATGATCT GCATCTGTTC ATTGAGCAGA TAGATGCACA CCCGAATGCA
ATCATTATCG GTGCACGGAA TATGGATCAG CCGAATGTGC CCGGCAAAAG TACCGTCGGG
AACCGGGCTT CCAGCTTCTG GTTTTGGGTG GTTACAGGTA TAAAGTTAAC CGATACACAA
TCGGGTTATA GATTATACCC GCTTGAACCC ATCAGTAAGA TTCATTTCCT GACACGTAAA
TATGAATTTG AAATTGAAGT AATGGTACGT TGTTCGTGGA AAGGAGTAAA TGTGCTGTCT
ATTCCGATCA AAGTATTTTA TCCGCCTGCT GACGAACGCA TCACACACTT CCGTCCGTTT
AAAGATGTTA CCCGGATAAC GTTGCTGAAC ATCGTTTTTG TATTGCTTTC GGCTTTTTGG
TTTACACCCA TCCGTTTAAT AAAAAACTTT TCATTAAAGG AAAGTAAAAA AAAAATCTAT
GACCATACGG TAGGCAGCCC GGATTCTATT CTGAAGAAAT CACTATCCAT GGGCTTTGGC
GTGTGCATGG GTATTACGCC TTTCTGGGGC TATCAGATCT GGATTGCATT GGCCCTGGCG
CATCTACTGA AATTGAACAA GGTAATCGTT GTTATATTTT CCAACATCAG TATTCCTCCG
TTTATTCCAT TTATCTTGTA TGGAAGTTAT TACATAGGAG CCACCCTTTT AAATAAACCA
ACGGAATTGG TTTTTTCAAC CGACCTGAGC ATGCAGGATA TTTTTAATTA TTTATATCCA
TACATATTCG GAAGTTTTAT TTTGGCACTT GTATCCGGTA TAGCTGTATT TATTGTATCG
CTGGCCATTC AACTGGTTAT TGAAAAGATT TCTCATAAAA ATAATAATAA AGTAGATGAA
TAG
 
Protein sequence
MEHTTLHHKF IHHACCVLIP TYNNATAIAA VIEGVLEYTS NIVIVNDGST DNTRSILENY 
PDLLVVEHAK NSGKGMALRT GFKAAFKHGY KYAISIDSDG QHYPDDLHLF IEQIDAHPNA
IIIGARNMDQ PNVPGKSTVG NRASSFWFWV VTGIKLTDTQ SGYRLYPLEP ISKIHFLTRK
YEFEIEVMVR CSWKGVNVLS IPIKVFYPPA DERITHFRPF KDVTRITLLN IVFVLLSAFW
FTPIRLIKNF SLKESKKKIY DHTVGSPDSI LKKSLSMGFG VCMGITPFWG YQIWIALALA
HLLKLNKVIV VIFSNISIPP FIPFILYGSY YIGATLLNKP TELVFSTDLS MQDIFNYLYP
YIFGSFILAL VSGIAVFIVS LAIQLVIEKI SHKNNNKVDE