Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2109 |
Symbol | |
ID | 4186315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2457072 |
End bp | 2458274 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638072109 |
Product | b-glycosyltransferase |
Protein accession | YP_678714 |
Protein GI | 110638505 |
COG category | [M] Cell wall/membrane/envelope biogenesis [S] Function unknown |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis [COG3216] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0591091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCATA CTACCTTACA TCATAAATTT ATTCATCACG CCTGTTGTGT ATTGATTCCT ACGTACAACA ATGCAACAGC TATTGCAGCT GTTATTGAGG GGGTATTGGA ATATACGTCG AATATTGTGA TTGTTAACGA CGGATCAACA GACAATACAC GCTCTATTTT AGAAAACTAC CCGGATTTGC TTGTTGTAGA ACATGCGAAA AACAGCGGTA AAGGAATGGC GCTGCGTACG GGTTTTAAAG CAGCATTTAA GCATGGCTAT AAATATGCCA TTTCCATTGA TTCGGATGGA CAACATTATC CGGATGATCT GCATCTGTTC ATTGAGCAGA TAGATGCACA CCCGAATGCA ATCATTATCG GTGCACGGAA TATGGATCAG CCGAATGTGC CCGGCAAAAG TACCGTCGGG AACCGGGCTT CCAGCTTCTG GTTTTGGGTG GTTACAGGTA TAAAGTTAAC CGATACACAA TCGGGTTATA GATTATACCC GCTTGAACCC ATCAGTAAGA TTCATTTCCT GACACGTAAA TATGAATTTG AAATTGAAGT AATGGTACGT TGTTCGTGGA AAGGAGTAAA TGTGCTGTCT ATTCCGATCA AAGTATTTTA TCCGCCTGCT GACGAACGCA TCACACACTT CCGTCCGTTT AAAGATGTTA CCCGGATAAC GTTGCTGAAC ATCGTTTTTG TATTGCTTTC GGCTTTTTGG TTTACACCCA TCCGTTTAAT AAAAAACTTT TCATTAAAGG AAAGTAAAAA AAAAATCTAT GACCATACGG TAGGCAGCCC GGATTCTATT CTGAAGAAAT CACTATCCAT GGGCTTTGGC GTGTGCATGG GTATTACGCC TTTCTGGGGC TATCAGATCT GGATTGCATT GGCCCTGGCG CATCTACTGA AATTGAACAA GGTAATCGTT GTTATATTTT CCAACATCAG TATTCCTCCG TTTATTCCAT TTATCTTGTA TGGAAGTTAT TACATAGGAG CCACCCTTTT AAATAAACCA ACGGAATTGG TTTTTTCAAC CGACCTGAGC ATGCAGGATA TTTTTAATTA TTTATATCCA TACATATTCG GAAGTTTTAT TTTGGCACTT GTATCCGGTA TAGCTGTATT TATTGTATCG CTGGCCATTC AACTGGTTAT TGAAAAGATT TCTCATAAAA ATAATAATAA AGTAGATGAA TAG
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Protein sequence | MEHTTLHHKF IHHACCVLIP TYNNATAIAA VIEGVLEYTS NIVIVNDGST DNTRSILENY PDLLVVEHAK NSGKGMALRT GFKAAFKHGY KYAISIDSDG QHYPDDLHLF IEQIDAHPNA IIIGARNMDQ PNVPGKSTVG NRASSFWFWV VTGIKLTDTQ SGYRLYPLEP ISKIHFLTRK YEFEIEVMVR CSWKGVNVLS IPIKVFYPPA DERITHFRPF KDVTRITLLN IVFVLLSAFW FTPIRLIKNF SLKESKKKIY DHTVGSPDSI LKKSLSMGFG VCMGITPFWG YQIWIALALA HLLKLNKVIV VIFSNISIPP FIPFILYGSY YIGATLLNKP TELVFSTDLS MQDIFNYLYP YIFGSFILAL VSGIAVFIVS LAIQLVIEKI SHKNNNKVDE
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