Gene CHU_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2107 
Symbol 
ID4186313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2452346 
End bp2453161 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content39% 
IMG OID638072107 
Producthypothetical protein 
Protein accessionYP_678712 
Protein GI110638503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.46407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAA CAAAATATTT TAAAATTTTA CGTAGTTTTT TGAATCCAGC TTTATTGAGG 
AGGTACTTTT CTTTTGTTCA GATCCAGAAA TTAAATAACA AGGAGCTTAA CGAAGAAAAA
AATAAGGATT ACAGGAACAT CGTTTACCTT CAGATGATGA TTATTCTTTC AGCCATGCTG
GTGAAAGAGA CGCTGGCAAT TGCTGGTGTT GATATAAAAG TTTCCAACAC AATCCGTGAT
ATCTTATTTT TAACTCTGGG CGGTTTATAT GTAATTGTGC TGTGGGATAT TTTGCGTAAT
CTCACCAAAT CAAACACGTT GATTGTGGCG ATGTTCCTGC TCATGCTGGT TGGCCTTGGT
GTAGCGTTTT TTGCCGTGAA TCCGGTATAT GATTTTTTTG AAAGTGACAA TGCCAAACGT
CCGTATTTAT TCTTTATACA CTTATCGCTT TTCATTATAG AATCTACTGT AATCTATCAC
TGCGTGTACG ATATTTTTAC GGGTAAAAAA CTTTCAGCAG AAAAAATATG GGGTGCTGCG
TGTATTTATT TGATGATCGG GATTTCATTC GGCAGTGTAT ATGATCTGAT CAATATTGTA
AACCCCGGCA GCATGGGTGT TCCGGTAGCG CAGGGACTGG AAAGTTACAT GGTGTGTATT
TATTACAGTA TGACCATCAT TGGTGGCCAC GATGCGTTTC TGCAAGCCAT TCCATTGATC
CAGAATCTGG GTATCATTGA AGCGGTGTGG TCTAACCTGT TTATTGTATT GCTGGTTGGC
CGCTTGTTAG GCAAACCGGA TACGGAAGAT GAATAA
 
Protein sequence
MPKTKYFKIL RSFLNPALLR RYFSFVQIQK LNNKELNEEK NKDYRNIVYL QMMIILSAML 
VKETLAIAGV DIKVSNTIRD ILFLTLGGLY VIVLWDILRN LTKSNTLIVA MFLLMLVGLG
VAFFAVNPVY DFFESDNAKR PYLFFIHLSL FIIESTVIYH CVYDIFTGKK LSAEKIWGAA
CIYLMIGISF GSVYDLINIV NPGSMGVPVA QGLESYMVCI YYSMTIIGGH DAFLQAIPLI
QNLGIIEAVW SNLFIVLLVG RLLGKPDTED E