Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2103 |
Symbol | cel |
ID | 4186309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2448305 |
End bp | 2449345 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638072103 |
Product | endoglucanase |
Protein accession | YP_678708 |
Protein GI | 110638499 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2730] Endoglucanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.438737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAA AAATATCCGT AGTGCTTGTC CTTCTTACAG GCATGTTACT TTCCGCTTCG GTTTTTGCAC AAAAGACAAT CGTTGAAAAA TACGGTAAGT TGTCTGTAAA AGGAAATTAT ATGGTTGGCC AGTACGGTGA TACCGTTCAG CTGAGAGGCA TGTCTTTATT CTGGAGTCAG TGGATGGGGC AATACTACAA TTCAGATGTG GTAAAGTGGC TGCGCGACGA TTGGAAATGT ACCGTAGTAC GTGCTGCAAT GGGCGTGGAA ATGGACGGAT ACCTTGAAAA TCCGGATACA GAAAAAATGA AGGTGATGGA AGTGGTGAAT GCTGCTATTG CCAAAGGCAT TTATGTGATC ATTGATTACC ACAGCCACGA AGCGCAGAAG AATCCTGCAG CGGCGCAACG GTTCTTTTCT GAGATGGCAA AAAAATACGG GAACATTCCC AATATTATTT ATGAAGTTTA TAATGAACCA CTGCAGGCAA CTTCCTGGAA TAAGGACATA AAGCCGTATG CAGAAGGTGT CATTACAAAA ATACGTGTGT ATGATACAAC AAACATTATT GTGGTAGGAA CAAGACAATG GTCGCAGCTG GTAACAGAGG CGGCAGCGAA TCCGATCACC CGTCAGAACA TCATGTATAC CCTTCATTTT TATCCGGGTA CGCACAAGCA GGAATTGCGT AATGAAGCAC AAAAAGCATT GGATATGGGT ATTGCCTTAT TTGTTACTGA ATATGGTACC TGCGATGCAT CGGGTAACGG AAATTTCAGT CCGGAAGAAA CTGCTTTGTG GTATGAATTT CTGGATGCCC ACAAGATCAG TTATTGCAAC TGGTCCATTG CGGATAAGCC CGAAACCGCT TCAGCTATTG TACCGGCAGC AAGTCCGTAT GGTGGCTGGG CTGATTATGA TCTTACACCG TCGGGCAAAT TAGTACGCGA TGATCTGCGC TTAAAAAATG GACCTATCTT TGACTCACTG GTAAAGACCA GTACTGGCGG AGTGTCTAAA AAGAAATCAA AAACAAAATA G
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Protein sequence | MIKKISVVLV LLTGMLLSAS VFAQKTIVEK YGKLSVKGNY MVGQYGDTVQ LRGMSLFWSQ WMGQYYNSDV VKWLRDDWKC TVVRAAMGVE MDGYLENPDT EKMKVMEVVN AAIAKGIYVI IDYHSHEAQK NPAAAQRFFS EMAKKYGNIP NIIYEVYNEP LQATSWNKDI KPYAEGVITK IRVYDTTNII VVGTRQWSQL VTEAAANPIT RQNIMYTLHF YPGTHKQELR NEAQKALDMG IALFVTEYGT CDASGNGNFS PEETALWYEF LDAHKISYCN WSIADKPETA SAIVPAASPY GGWADYDLTP SGKLVRDDLR LKNGPIFDSL VKTSTGGVSK KKSKTK
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