| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2080 |
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| Symbol | |
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| ID | 4183459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2427118 |
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| End bp | 2430594 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638072080 |
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| Product | sensor histidine kinase/response regulator fusion protein |
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| Protein accession | YP_678685 |
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| Protein GI | 110638476 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.264996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTA CATTAGATAA TAAAATTCTG GCTGGATTAG GAGCCTGCAC GATTGTTTTG
ATTATTGTGG GCTTTATTTC CTACCGGAAT AGTGAAAAAT ACCGTGAAAC CAACGAATGG
GTAGACCATA CCCACAAGGT TTTGTACGCA TTGGAACAGA TTTTAGTTAC AGAGATTGAT
GCCGAGACTT CCATGCGCGG GTATGTTATT ACCGGAACCA GCAGTTTTTT AAAACCTTAT
AACCGCGCCA TCGATAATAT TTATTTTAAT ATTGATATTG CTAAGGACTT AACGGTTGAT
AATACGGTTC AGCAAAAACG GATTGCAATG ATCCAGGGTC TGGTAGATCA GCATATGACA
CATCTGGATA GCTGTATTAA GCTGCGCCAT ACCGATTATG ATAAAGCCCA GTCTCTGGTT
GCCAGTGAAA ACGGCAAACG CATCATGGAT AAGATCCGCG ACAATATTGA ACTTGCCAAG
GATGAAGAAT TCCGGTTACT GGAAATCCGC AAGAAAGATA GTGATAACGA TGCGCGTGAT
TTTAACTTTG TTTTCATTAC ACTTATTGTT TGTATCATTA TCGTATTAAT AGCGGTTTAT
TTTATTATTA TTTCAAATTT ATCGGCCTTA CGCAAAGCAG AAAAAACGAC AGCAGATAAA
AACTGGACAC TTACCGGCAG CGCCGGCCTG GCACAGGATA TGCAGGGTAA TCTACTCATC
CAGGAACTTT GCCAGGCAGT TATCAACCAT TTTGTACGGT ATCTCAATAT TAATCTCGGG
GCGTTGTATG TATCCAATGA GGTGGAATCT TCTTTACATC TGTTAAGCGG GTATGCACTT
TCCAAAGCGA AAAAAGAAAT GCCGGCTATC CGTTTTGGTG ATGGCATTGT CGGTCAGGTA
GCTCAGGAAA GAAGATTGCT TGTATTGGAA AACATTCCTG GGGAAAATTT TGTACTGGAA
TCAGGTTTGG GAGATATTCA GCCCAGTCAT ATTTTAATTG CTCCCATTCT GTATCAGGAA
CGTATGCTTG GCGTAATTGA ACTGGGGAGC CTTGAGCCTT TTACCGAAAA TCACAAAGAG
TATATGAGCC ATGTTATGGA TAGTATAGCC ATTGCTATTA CATCGGCACA TGCACGGGAA
AAAGTACGCG AACTGCTGGA AGAGACACAA CGCCAGTCGG AAGAACTGGA AGCTCAGCAG
GAAGAGCTGA AACAGTATAA CGAAGAGCTA CAGGTAAAAA CTGAATTGCT TGAAAAAAAT
GAAGCCGAAT TACGTTCGCA ACAGGAAGAA CTGCACCAAA GCAATGAAGA GTTAGAAGAA
AAAGCGAACC TGCTGGAAGA GCAAAAAGAG ACGCTTGAAA ATGCTAAAAT GCAGATTGAA
ACGAAAGCAC ATGAGCTTGA ACTGAACAGT AAATACAAAT CAGAATTTCT AGCAAACATG
TCGCATGAAC TGCGTACACC GCTGAACAGT ATCCTGATTC TCTCTCAGTT GCTGGCGGAT
AATAAAAATA AATCGTTAAG TGAAAAAGAA GTTGAGTTTG CGCAGAACAT CTGTAATTCA
GGTTCTGACC TGCTGGAACT TATAAACGAG ATTCTGGATC TTTCTAAAGT AGAATCCGGA
AAGCTGGATC TTGAAATTGA AGATGTATCT TTAAGCAAGA TCTGCAGCAG CATTCATGCC
ATGTTTGATG AAGTGGCTAA AAAGAAATTG ATTCAGTTTA AGGTTAACTG TTCAGAAAAA
TTACTTCAGA CGACTGTTCA TACAGACCGT CAGCGACTGG AGCAGATCAT ACGAAACCTG
CTTTCAAATG CCTTTAAGTT TACAAGTGCT AAAGGTGCTG TAACCTTTAA GATAGAGGCG
GCTTCTGAAT CAACCGTTTT CCGAAACAAA AATCTGAATG CCCATAATTG CCTGGCACTT
TCTGTTACGG ATACCGGTAT CGGTATTCCG CAGAATAAGC AGCAGATCAT TTTTGAAGCC
TTCCAGCAGG TGGATGGATC AACCAAACGC AAGTATGGCG GTACAGGATT GGGTCTTTCG
ATCAGCAGGG AACTTTCAAC AGCTTTGGGC GGTGAGATAC ATGTATTCAG CGAAGAAGAC
AAAGGGAGTA CCTTCACCTT GTTTATTCCA TACAGCTTCA ATGAATCCAA TACTATCAGC
ACAGACCGGT ATGCAGATGC CGTTAAGCCG GAGCTGGTTG CCGCAGCCTT AACCGAACCT
GTGCTTTCGG CCTCTCTGGA AGAAGAAGCT CTTGCTGAAG AAGCGGAAGA CTTTTCGGAT
GACCGGAATA TGATTACTGC AAATGACAAA GTGGTCTTGC TGATGGAAGA CGATATTGTT
TTTGCAAAGC TGATGCTTGA TTTCCTGCAC GAACGTAAGT ATAAAGGTAT TATTGCTACC
AGAGGCAATA CCGGCTTAAG CTATGCACGC CAGTATAAAC CGGACGCGAT CATGCTGGAT
ATGAAGCTGC CTGTTATGGA TGGTGCGGAA GTATTGAAAC AATTGAAAAA TGATCCGGCC
CTGAGACATA TTCCGGTGCA GATTATTTCA GGCTATGATC GCAAGCGTGA AGGCCTTGAA
CTGGGGGCGT TTGACTATAT CCGCAAGCCG GTCACAAAAG AAGTTTTGTT AAAGGCATTT
GATAAGATCG AAGACTTTGG GCGTAAAAAA CTGAAAAAAT TACTTGTTGT TGAAGATAAT
GAAACACAGA ATACGGCTAT CCGCGAATTG GTGGGTAACG GTGATGTAAA GAGTTATTCT
GCGTACACAG GTAAGGAAGC CTATGAGATG CTTTTAAAAG ATGAATACGA TTGCATTATC
GTTGACCTGG GTTTGCCTGA TATGTCGGGT TTTGACCTGA TTGAACAAAT CAAAGAAAAA
CCGGAAATAA AAGGTATTCC GATTATCGTA TACACGGGCA GAGATCTTAC GGCTGATGAA
AAAAACCTGC TGAATAAACT GGCCAGTGCG GTTGTATTAA AAACAGCCAA TTCACAGGAG
CGGTTGCTGG ATGAAACAAC ATTGTTCCTG CACCGTGTAG AATCTAAATT ACCGAAAGAA
AAACAACACA TCATCCGTAA ACTGCATAAG ACAGAAGAAA TTCTCAAATC TAAAAAGGTA
CTGGTTGTTG ATGACGATAT ACGCAACGTG TATTCATTAA CCAATGCACT GGAAGAAGAA
GAGATGACTT GTTTCATTGC AGAAAATGGA AAAATAGCCT TGCAGGTGCT GACAGAAAAT
CCGTCTATCG AAATTGTACT GATGGATATC ATGATGCCTG AAATGGATGG GTATGAAGCT
ACAAAAGCGA TACGCAACAT GCCGCAATTT GATAAGATTC CGATCATTGC CATTACAGCT
AAAGCAATGA AAGGCGATCG GGAAAAATGC CTGGCAGCAG GTATGTCGGA TTATATTTCG
AAGCCGATTA ACATGGAACA ATTGCTTTCA TTGTTACGTG TCTGGCTGTA TAATTAA
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| Protein sequence | MKFTLDNKIL AGLGACTIVL IIVGFISYRN SEKYRETNEW VDHTHKVLYA LEQILVTEID
AETSMRGYVI TGTSSFLKPY NRAIDNIYFN IDIAKDLTVD NTVQQKRIAM IQGLVDQHMT
HLDSCIKLRH TDYDKAQSLV ASENGKRIMD KIRDNIELAK DEEFRLLEIR KKDSDNDARD
FNFVFITLIV CIIIVLIAVY FIIISNLSAL RKAEKTTADK NWTLTGSAGL AQDMQGNLLI
QELCQAVINH FVRYLNINLG ALYVSNEVES SLHLLSGYAL SKAKKEMPAI RFGDGIVGQV
AQERRLLVLE NIPGENFVLE SGLGDIQPSH ILIAPILYQE RMLGVIELGS LEPFTENHKE
YMSHVMDSIA IAITSAHARE KVRELLEETQ RQSEELEAQQ EELKQYNEEL QVKTELLEKN
EAELRSQQEE LHQSNEELEE KANLLEEQKE TLENAKMQIE TKAHELELNS KYKSEFLANM
SHELRTPLNS ILILSQLLAD NKNKSLSEKE VEFAQNICNS GSDLLELINE ILDLSKVESG
KLDLEIEDVS LSKICSSIHA MFDEVAKKKL IQFKVNCSEK LLQTTVHTDR QRLEQIIRNL
LSNAFKFTSA KGAVTFKIEA ASESTVFRNK NLNAHNCLAL SVTDTGIGIP QNKQQIIFEA
FQQVDGSTKR KYGGTGLGLS ISRELSTALG GEIHVFSEED KGSTFTLFIP YSFNESNTIS
TDRYADAVKP ELVAAALTEP VLSASLEEEA LAEEAEDFSD DRNMITANDK VVLLMEDDIV
FAKLMLDFLH ERKYKGIIAT RGNTGLSYAR QYKPDAIMLD MKLPVMDGAE VLKQLKNDPA
LRHIPVQIIS GYDRKREGLE LGAFDYIRKP VTKEVLLKAF DKIEDFGRKK LKKLLVVEDN
ETQNTAIREL VGNGDVKSYS AYTGKEAYEM LLKDEYDCII VDLGLPDMSG FDLIEQIKEK
PEIKGIPIIV YTGRDLTADE KNLLNKLASA VVLKTANSQE RLLDETTLFL HRVESKLPKE
KQHIIRKLHK TEEILKSKKV LVVDDDIRNV YSLTNALEEE EMTCFIAENG KIALQVLTEN
PSIEIVLMDI MMPEMDGYEA TKAIRNMPQF DKIPIIAITA KAMKGDREKC LAAGMSDYIS
KPINMEQLLS LLRVWLYN
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