| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2057 |
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| Symbol | atoS |
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| ID | 4185813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2406396 |
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| End bp | 2407454 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638072057 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_678662 |
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| Protein GI | 110638453 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.566261 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTAAGGC ATTCCAGACA TAATGCAGTA TTTATTCTTG ATACAGCAGG TATAATCATG
GGTATAAGTG AAGGTGCACA ACGCAGTTAT GGGTATACGC ATAAAGACGT TCACGGCAAG
TATTTTGATA TGTTATTTAC CGAAGAGTCA CGTAAGCAGC AAAAGCCTGA GTTGGAACTT
GCTAAGGTAT TGCAGTATGG AACGGCGGCA GATTATAATG AATTTGTACA TAAGGACGGC
CGGCATATAT GGACAGAAGG AGAGTCGCTG CTTATAACCG ATGTGTGGGG TGATTCATTT
ATCATTAAAA ATGTTCATTC GCTTGATAAA GAAAAGGAAG AACAACGTAA TCTTCAGCAG
CAGAATGAAA AATTGCTGCG CATCAATAAT GATCTGGATA CTTTTGTATA TACCGCATCA
CATGATCTTA AAAATCCGGT AAGTAATATT GAATCACTTG TTTCCATCAT GCAGTATGAA
TTGAAGCACG GAGCAGATGC GGAAGCGGTA GAACCTGTTA TGTCACGTAT AACAGAAGCT
CTTAACAGAT TCAAAACAAC TCTGAATGAA CTTACAGAAA TCAGCAGAAT TGATGCACCA
GTCGATACAG ATGAAATGTA TGTGTCGTTT GATTCGATCC TGCAGGAAGT AATGTATGAT
GTTCAGGATC TTGTTGATAG TACAGAAGCT TCTATACAAT CAGATTTCAG TGCAGCAACA
ATGGTACGTT TTTCAAAAAA GAATGTGCGC AGTATCTTAT TTAATCTCCT TTCCAATGCG
CTTAAATACA GGTCACCGGA GCGTAAACCG GAGATTTATA TAGAGACTAA ACCAGCTGGA
GAATACATAT TACTTTCAGT TCGTGATAAT GGGATAGGTA TTGAACCTGC ACAGCACAAA
AAAGTGTTTC AGTTTTTCAA ACGTCTGCAT ACACATGTAC AAGGCACAGG TGTTGGCATG
GGTATCGTTA AAAAAATAAT GGATAATACA GGTGGAAAGA TAACGCTTGA AAGCATTCCT
GGCAAAGGAT CTGCATTTAC CGTACATTTT AAACAATAG
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| Protein sequence | MLRHSRHNAV FILDTAGIIM GISEGAQRSY GYTHKDVHGK YFDMLFTEES RKQQKPELEL
AKVLQYGTAA DYNEFVHKDG RHIWTEGESL LITDVWGDSF IIKNVHSLDK EKEEQRNLQQ
QNEKLLRINN DLDTFVYTAS HDLKNPVSNI ESLVSIMQYE LKHGADAEAV EPVMSRITEA
LNRFKTTLNE LTEISRIDAP VDTDEMYVSF DSILQEVMYD VQDLVDSTEA SIQSDFSAAT
MVRFSKKNVR SILFNLLSNA LKYRSPERKP EIYIETKPAG EYILLSVRDN GIGIEPAQHK
KVFQFFKRLH THVQGTGVGM GIVKKIMDNT GGKITLESIP GKGSAFTVHF KQ
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