| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2049 |
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| Symbol | rsaD |
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| ID | 4186710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2396224 |
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| End bp | 2397981 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638072049 |
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| Product | ABC transporter, ATP-binding/permease |
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| Protein accession | YP_678654 |
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| Protein GI | 110638445 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAC TGCTAAATTA TTTAAAGAAT TACAAAGGAC TTATTGCAAT AGCATTGCTT
CTGGCATCTA CAAGTCAGGT CTTTTCTTTA CTGGATCCGC ATATAACCGG TAAAATCGTC
GATAATTTTA TAGAAAAAAA AGAGATACTT TCCCGTGCGG AGTTTGTTAA GGGCATTTTA
ATTCTTGTCG GATTTTCCAT CGGTGCTGCT ATGGTTTCCC GGATTGCTAA AAATCTTCAG
GACTACTTCA CGAGTATTGT TGTGCAGAAA TTAGGGGCAC AGATGTATGC CGATGGTTTA
AAACATTCGT TAGAGCTGCC GTATCAAACG TTTGAAGACC AACGAAGCGG AGAGACGCTG
GGTATTCTTC AAAAGGTGCG TACCGATTCA GAAAAATTCA TTACCTCTTT TATCAGTGTT
TTATTCGCAA GTGTAGTGGG TTTACTGTTT GTTGTTGTGT ATTCCTTATC TGTAAGTTAT
AAAGTGACGC TGGTATACTT CGCTGCGGTT CCTATTATCG CTTTTACAAG CTGGCTGCTG
AGCCGTAAGA TAAAAGTTGT TCAGAAAAGT ATTGTAAAAG AAACTACCGC GCTGGCTGGT
TCTACTACAG AGTCGCTTCG CAACATTGAA CTGGTGAAGA GCCTTGGACT TGCCAATCAG
GAAATTGAAC GGCTGAATAA CACGACATTT AAGATTCTGG CTCTTGAGCT TAAAAAAGTA
AAATACGTGC GCAGTATGAG TTTTCTGCAA GGTACAACGG TAAACTTTAT ACGCAGTGTG
ATGGTGGTTA TTTTACTGCT GCTCATTTTT GATAATGAAT TATCACCGGG TATGTATTTT
ACGTTTTTGT TTTATTCCTT CTTTTTATTC GGTCCGCTGC AGGAGCTGGG AAATGTGATC
ATTACATACC GGGAAGCAGA AGTATCCCTG TTAAATTTTG ACCGTATATT AAATCTTCCA
AAAGAGATTA AACCACAACG TCCGGAAACA ATCGGACAGA TAAACACCTT ACGTTTTGAT
GCCGTGAGTT TCAAGCATCA ATCTGCCCGC AGCAATGCAC TCAATGGCAT TTCTTTTTCA
ACGCACAATG GACAAACTAT TGCGTTTGTT GGGCCGTCAG GATCAGGAAA AACAACATTG
GTGAAGCTGC TGGTAGGACT GTACCCGCCT AAAGACGGAA GTATTCTGTA TAACGATGTA
TTAAGTACAA ACATTGATCT GGATGAACTG CGTGAAAAGA TCGGATTTGT TACGCAGGAT
ACGCAGTTGT TTTCCGGAAC GATTCGTGAG AATTTATTAT TCGTGAGACC TGATGCTTCA
GACGAAGAGT GTTTGGCTGT ATTGCATAAA GCTGCTTGCG GCACATTGTT AGCCCGTGCC
GATAAAGGAT TAGATACGGT AATAGGCGAG GGTGGAGTAA AGGTTTCAGG AGGAGAAAAG
CAACGCTTAT CGATTGCACG CGCACTGTTG CGTCAGCCGG ATATTCTGGT ATTTGATGAA
GCCACATCGT CGCTGGACTC AATAACGGAA GAAGAAATTA CCCAAACGAT CCGCGAGGTG
TCGACCGTTA AAGATCATAT TACCATACTA ATTGCACACC GTTTATCTAC TATCATGCAT
GCCGATACAA TATTTGTTCT TGAAAAAGGT AACATCATTG AATCCGGCAA ACACGAAGAC
CTGTTGCTCG AAAAAGGATT GTACTACGCG ATGTGGCGTC AGCAGATTGG CGAAAAGGCA
CACGCTGAAG GCGTGTAG
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| Protein sequence | MKLLLNYLKN YKGLIAIALL LASTSQVFSL LDPHITGKIV DNFIEKKEIL SRAEFVKGIL
ILVGFSIGAA MVSRIAKNLQ DYFTSIVVQK LGAQMYADGL KHSLELPYQT FEDQRSGETL
GILQKVRTDS EKFITSFISV LFASVVGLLF VVVYSLSVSY KVTLVYFAAV PIIAFTSWLL
SRKIKVVQKS IVKETTALAG STTESLRNIE LVKSLGLANQ EIERLNNTTF KILALELKKV
KYVRSMSFLQ GTTVNFIRSV MVVILLLLIF DNELSPGMYF TFLFYSFFLF GPLQELGNVI
ITYREAEVSL LNFDRILNLP KEIKPQRPET IGQINTLRFD AVSFKHQSAR SNALNGISFS
THNGQTIAFV GPSGSGKTTL VKLLVGLYPP KDGSILYNDV LSTNIDLDEL REKIGFVTQD
TQLFSGTIRE NLLFVRPDAS DEECLAVLHK AACGTLLARA DKGLDTVIGE GGVKVSGGEK
QRLSIARALL RQPDILVFDE ATSSLDSITE EEITQTIREV STVKDHITIL IAHRLSTIMH
ADTIFVLEKG NIIESGKHED LLLEKGLYYA MWRQQIGEKA HAEGV
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