Gene CHU_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2047 
Symbol 
ID4186708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2393236 
End bp2394300 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content35% 
IMG OID638072047 
Producthypothetical protein 
Protein accessionYP_678652 
Protein GI110638443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.697732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAG AAGAGCGTTT TGCTTTTGAA GAAAGACTTG CTCTGGATGA AACATTGTCG 
GCCAAAGTCA ATGAAGTACG GCTTACCAAT GAAGCAATCT ATTATGCATC ATTGGCTGAA
CTAAAAAACA CCATTGGTAA GGACATTAAA AATATTAAAT ACAAACCTTC CTTTAACTGG
AAAAAAGCCT CGTACATTTC TATTGCTTCC CTGGTATTAC TATCCGGAAT AACAACATAC
GTTTTTGTCA ACAATACAGA CAACAAATCT GTCAAACAAG ATCGTGTAAA AAATAAACAG
CGTGCTATTC AGGCAAACAA CGGTTCTGTA ACCTCAGAGA AAGCCGTTGA TGCAAAGAAA
TCATATCAGC AACAACCGCT TACAATACCA GGTAAAATAG ATTCTACACA AAAAGATGTT
CCATCTAAAC AGAATTTAAT CTTACCTGCA GATAACAATG TGCAACAGGT TGAAAAAATA
AAACCTGCAG ATTCCGGAAA TACGCTTCAA AAAAATGATT CTGACCAAAG TATTAAAAAT
ATTGTACCAC CCGAAACAGA TACTAAAATC GCCTGTGACA AGTTATTTAA AATAAATACG
GAGGCTTCGT GCAAACAAAA AGAAACAGGC AGCATCCATA TTATTTCAGA CGGGGCATAT
TCGTATACAT ACCAGGTCGA TATTCAAAGC ACTTCAGGAT CAAAAGCAAC GTTTACCAAT
ATGCCCTCAG GAGTGCATGA AATTCTGGTT ACTTATGGCA AAGAATGTAT ATATAAGAAA
AAGGTTTCAA TAGCCGAAAA ATGGTGTGCT ATGAATGAAT CATATAGCTT TAATCCGGAT
TACAATGAAA AATGGATTTT AAATTATGAA ACCGGCGCAT CGGGAACATT TACTATCTTT
GATAAATCCG GAAAAGATAT ATATAGCAAT ACATTCGGAT CCGGAAATGA AGAATGGAAC
GGAACCAGCA ATCAAGGAAC AACAGTGCCT GTTGGTATTT ATATTGCATT CATTAATTAC
TCGGATGGAC GAAAAGAAAA AGTAGAATTA ACAATTGTCA GATAA
 
Protein sequence
MSEEERFAFE ERLALDETLS AKVNEVRLTN EAIYYASLAE LKNTIGKDIK NIKYKPSFNW 
KKASYISIAS LVLLSGITTY VFVNNTDNKS VKQDRVKNKQ RAIQANNGSV TSEKAVDAKK
SYQQQPLTIP GKIDSTQKDV PSKQNLILPA DNNVQQVEKI KPADSGNTLQ KNDSDQSIKN
IVPPETDTKI ACDKLFKINT EASCKQKETG SIHIISDGAY SYTYQVDIQS TSGSKATFTN
MPSGVHEILV TYGKECIYKK KVSIAEKWCA MNESYSFNPD YNEKWILNYE TGASGTFTIF
DKSGKDIYSN TFGSGNEEWN GTSNQGTTVP VGIYIAFINY SDGRKEKVEL TIVR