| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2043 |
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| Symbol | |
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| ID | 4186704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2383107 |
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| End bp | 2386850 |
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| Gene Length | 3744 bp |
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| Protein Length | 1247 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638072043 |
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| Product | xylanase, CBM9 module, glycoside hydrolase family 10 protein |
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| Protein accession | YP_678648 |
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| Protein GI | 110638439 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAC ATCTTCTAAA AACAATTGGC CTGATCTGCC TGCTGTGCAT ATTTCAAACC
GGGCAAGCGC AGATTGGTAA ATGCAAAGGT AAATACTTAG GAAACATCAT TGCCGGTAAC
GTGCCGAGTA CGTATACAAC CTATTGGAAT CAGGTGACTT CCGAAAATGC TTCTAAATGG
GGATCTGTAG AGGGGACTAA GGGGCAATAT AACTTTGGAG GTTCTGATAT CTGTTATAAC
TGGGCAAAAA ATAACAATGG CATATTTAAA TATCACACCC TTATTTGGGG AGCGCAAACT
CCTGGTTGGG TATCAAATAC GAATACAAGT GCTGCAACTA TACAAGCTGC TATTGATCCA
TACTTTAAAG CTGTAAGAGA CCATTACGCG GCTATGGGAG GTTTGAAAAT GATCGATGTA
TTAAATGAAC CTGTCAATAC TCCTATGCCA GCCAATTTGA AAGCAGCACT TACAGCAGGA
TACAAAGCTG AACCAGCTAA TGCAGGTGAT TTGAATAATC AATATGGATG GGCAATATGG
TGCTTTCAAT TAGCGAGAAA ACATTTTCCG GATGCCGTAT TGTTAATCAA TGAATATAAC
ATTGAAATGA ATTGGAATAA CTGCAGAGCA CCTTATATAG CCATGTCAAT AGCTATAAAG
AATGCACCAA ATCTTACAGA TGGTAAGAAA AATTTAATTG ACGGAGTAGG GTTGCAGGCA
CACGGCATTA ATAATTTAAC AGCTGCTAAC TTCAAGGCTT GTATAGACGA AATCTGGAAC
AAAACCGGCC TGCCTATTCA TATTACAGAA TTTGATCAGA CAGCTGATCC AAATGAAGCG
AAACAACAGG CTGTTTATTC AACGTTGATT CCGGTTGCAT GGGAACATCC GCATGTTGCA
GGTATTACAT TCTGGGGATA TATTCAGGGG CAAACCTGGA TTGGAGGAAA CAAACAAACA
GGCGCCAGCG GTACGGATTC AGGAATCATT TATGCAAACG GAACCGAACG TCCGGCTATG
ACCTGGCTGA AACAATATTT CGCTTCTCAG GCGAGTTTAT CCTGCTGTCC GGCTCCAGGG
CCTTTCGCGT CGTGTAACAA TACCAATCCT TCGCCGGTAG TATCGCTTAC CGCGCCTACA
AACAATACAG TTTATACAGA AGGTGATAAT ATAACGATCA ATGCCACGGC AACGATCACA
AGCGGGAGCA TTTCCAAAGT AGAATTTTAT AACGGAACAA CGTTGTTGGG TACAGATGCA
AGTTCACCAT ACAGCTATAC AATCACAGCT GCAGCAGCAG GTACCTATCC GGTCACTGCC
AAAGCAACGA GTGCAGCCAA TGCAGTAACA ACGAGCACGG CAATAAACAT TCAGGTAGCA
AAACCTATTT ACCAGACCGG TTCTGCACCC ACAATCGATG GAACCGTTGA CGGCTTATGG
AGCAATTTTC CATCCACAGG TATCACAAAA AACAATACCG GTACGATCAG CTCAGGTACA
GATCTGTCGG GTAACTGGAA AGCGATGTGG GATGCGTCTA ATCTGTATGT ATTGGTTCAG
GTAACCGATG ATGTGAAGCG CAACGATGGG GGAACGGATG TATACAACGA CGATGGCGTT
GAAGTATACA TTGATCTGGG CAACACCAAA GCAACGACAT ACGGCACCAA CGACCAGCAG
TACACGTTCC GCTGGAACGA TGTTACAGCG GCCTATGAGA TCAACGGACA TCCGGTAACA
GGAATAACCA AAGGCATCAG CAATACAGCA ACCGGTTATA TTGTGGAGGT GAGCATCCCT
TGGTCTACCA TTGGCGGTAC GGCTTCATTA AATTCATTCC AGGGCTTTGA AGTCATGATC
AATGATGACG ATGACGGAGG AGCAAGAGAA GGTAAGCTTG CCTGGGTTGC GTCTACAGAT
GATACGTGGA GCAATCCGGC TTTAATGGGA ACAGTTGTAT TAAAAGGATT GAATTGTACG
GTACCGGCAG CAGCGATAAC GGCAAGCACG GCAACCACAT TCTGCTCCGG AGGCAGTGTA
GTATTGAATG CAGGTACAGG CACCGGATAC AGCTATGTAT GGAAGAACGG TACAGCAGTA
ATCACAGGAG CGACAGGATC TTCTTATACA GCCACCGCAT CGGGCAGTTA TACGGTAACA
GTAACAAACC CGGGCGGCTG TTCAGCAACC TCAGCAGGGA CTACGGTGAC GGTAAATGCC
TTACCGGTTT TAACGCAGTA TGCACAGGTA GATGGCGGAA CCTGGAACCA GGTATCAGGC
GCAACGGTGT GTGCTGGCTC TTCGGTTGTA CTGGGGCCTC AGCCGACAGT AAATACAGGC
TGGAGCTGGA CAGGTCCGAA CGGTTACAGT GCATCGACCA GAGAGATTAC GTTAACTGGA
GTTACACCAA CACAAGGAGG TATTTATACG GCAAGTTATA CAGATGGAAA TACGTGTAAA
TCAACTTCTG TATTTACGTT AACGGTAACT GCACTGCCGG CCGCAGCGAT TACGACAAGT
ACACCGACAA CATTCTGCGC AGGCGGCAGC ACAACACTGA CAGCAAGTTC AGGTGCATCC
TACAAATGGC TGAACGGCAC GGTCGCAATC ACAGGAGCAA CTGCACAGAC CTATACCGCA
ACAGCCGCGG GAAGCTATAC GGTTGAAGTA ACGAATGCGG GTAACTGCAA AGCAAGCTCA
GCAGCAACAG TAGTAACAGT AACTGCACTA CCGGCCGCAG CGATTACGAC AAGTACACCG
ACAACATTCT GCGCAGGCGG CAGCACAACA CTGACAGCAG GTTCAGGTGC ATCCTACAAA
TGGATGAACG GCACGGTCGC AATCACAGGA GCAACCGCAC AGACCTATAC CGCAACAGCC
GCCGGAAGCT ATACCGTTGA AGTAACGAAT GCGGGTAACT GCAAAGCTAC TTCAGCAGCA
ACAGTAGTAA CAGTAACTGC ACTGCCAACT GCTACAATCA CAGCAACTGG TTCAACAACG
ATTCCTCAGG GCGGAAGTGT AGTATTACAG GCGAATGCAG GTTCAGCTTT GACCTACAAA
TGGTTCAACG GCACGGTCGC AATCACAGGA GCAACCGCAC AGAGCTATAC AGCAACGAAC
GCGGGAAGCT ATACGGTTGA AGTAACAAAT GCGGGTAACT GCAAAGCAAG GTCAGCAGCA
GCAACAGTAA GCGTGGTTGC AAATCAGCCA TCTGTTATTA CAATTACTTC ACCGGCACCG
AATGCTGCAG TAACAGGAGC GATCGATATT TCGGTGAATA TCACAGATGC GGATGGTAGC
ATAACCCTTG TAGAGTTTTT AGCAGGCGAT GATGTAATCG GCACAGCAGC AGCAGCGCCG
TATACGTACA CATGGGACAC TCCAACGGCA GGTTCTCATA CAATTACGGT TCGGGTAACA
GACAGTAACG GAGGAGTCAC AACTTCTGGA CCGGTAACAG TTACATCGGA ATCCATCACA
ACAGGCGTGC AGGCATTGAA TACATTGAAT GCAGCTGTAT ATCCGAATCC ATCAAACGGC
ATCGTATTTA TTGATACAGA TGCAGACTTA TCAGATGCAA GCTTTACACT GATAGATGTG
TTGGGTAAAG AAGGAACTGT TTCTTCAACA GCAACCGGCA ACGGAGCGAT GATAGATGTA
AGCAGTCTGG CGGGTGGCAC TTATGTGCTG ATCGTTAAAA AAGATACTTC AGTGATTCGG
AAAAAAATCA CTGTAATCCG GTAA
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| Protein sequence | MKQHLLKTIG LICLLCIFQT GQAQIGKCKG KYLGNIIAGN VPSTYTTYWN QVTSENASKW
GSVEGTKGQY NFGGSDICYN WAKNNNGIFK YHTLIWGAQT PGWVSNTNTS AATIQAAIDP
YFKAVRDHYA AMGGLKMIDV LNEPVNTPMP ANLKAALTAG YKAEPANAGD LNNQYGWAIW
CFQLARKHFP DAVLLINEYN IEMNWNNCRA PYIAMSIAIK NAPNLTDGKK NLIDGVGLQA
HGINNLTAAN FKACIDEIWN KTGLPIHITE FDQTADPNEA KQQAVYSTLI PVAWEHPHVA
GITFWGYIQG QTWIGGNKQT GASGTDSGII YANGTERPAM TWLKQYFASQ ASLSCCPAPG
PFASCNNTNP SPVVSLTAPT NNTVYTEGDN ITINATATIT SGSISKVEFY NGTTLLGTDA
SSPYSYTITA AAAGTYPVTA KATSAANAVT TSTAINIQVA KPIYQTGSAP TIDGTVDGLW
SNFPSTGITK NNTGTISSGT DLSGNWKAMW DASNLYVLVQ VTDDVKRNDG GTDVYNDDGV
EVYIDLGNTK ATTYGTNDQQ YTFRWNDVTA AYEINGHPVT GITKGISNTA TGYIVEVSIP
WSTIGGTASL NSFQGFEVMI NDDDDGGARE GKLAWVASTD DTWSNPALMG TVVLKGLNCT
VPAAAITAST ATTFCSGGSV VLNAGTGTGY SYVWKNGTAV ITGATGSSYT ATASGSYTVT
VTNPGGCSAT SAGTTVTVNA LPVLTQYAQV DGGTWNQVSG ATVCAGSSVV LGPQPTVNTG
WSWTGPNGYS ASTREITLTG VTPTQGGIYT ASYTDGNTCK STSVFTLTVT ALPAAAITTS
TPTTFCAGGS TTLTASSGAS YKWLNGTVAI TGATAQTYTA TAAGSYTVEV TNAGNCKASS
AATVVTVTAL PAAAITTSTP TTFCAGGSTT LTAGSGASYK WMNGTVAITG ATAQTYTATA
AGSYTVEVTN AGNCKATSAA TVVTVTALPT ATITATGSTT IPQGGSVVLQ ANAGSALTYK
WFNGTVAITG ATAQSYTATN AGSYTVEVTN AGNCKARSAA ATVSVVANQP SVITITSPAP
NAAVTGAIDI SVNITDADGS ITLVEFLAGD DVIGTAAAAP YTYTWDTPTA GSHTITVRVT
DSNGGVTTSG PVTVTSESIT TGVQALNTLN AAVYPNPSNG IVFIDTDADL SDASFTLIDV
LGKEGTVSST ATGNGAMIDV SSLAGGTYVL IVKKDTSVIR KKITVIR
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