| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2042 |
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| Symbol | |
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| ID | 4186703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2379219 |
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| End bp | 2382872 |
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| Gene Length | 3654 bp |
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| Protein Length | 1217 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638072042 |
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| Product | CHU large protein, xylanase, CBM9 module, glycoside hydrolase family 5 protein |
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| Protein accession | YP_678647 |
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| Protein GI | 110638438 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5520] O-Glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT TATTTACTGT TTTATTTTAT TTAAGCACGT GTCTGGTATG GGCACAAACT
TCCACCGTTA ATTTAACATC CGAAAAACAA TACATCCGGG GATTTGGAGG TATCAATCAC
CCGGAATGGG CTGGAGACAT GACAGCGGTA CAACGTACTA CTGCATTTGG CAATGGTGCC
GGTGAGATGG GATTAACCGT ACTCCGGATT TTTGTTAATG ATGATAAAAC CCAATGGAAT
AAAGCACTGG CGACAGCGTT GCGTGCGCAG CAATTAGGAG CTACCATATT TGCAACGCCA
TGGAATCCGC CTGCAAGTAT GTGTGAAACG ATAACACGTA ATAACAGACA GGAAAAAAGA
TTAAAGCCCG GTAGTTATAG TGCGTATGCA CAACATCTTA TTGATTTTAA TAATTATATG
AAAAACAATG GCGTCAATTT GTATGCGATG TCATTTGCCA ACGAACCGGA TTGGGGATTT
GATTGGACCT GGTATAGTGC TGATGAAGTG TATAATTTTA CTAAAAATAT TGCCGGAACA
TTACGCGTAA ATGGAATTAA AGTAATCACG GCAGAATCGT TTTCATATAA TAAATCCTAT
TATGATAAAG TATTGAATGA CCCGACAGCT TTATCAAATA TTGATATTAT CGGATGTCAT
TTATATGGTA GTGATGCAAA TTCTCCGGTT TCGGTTTTTA ATTACCCGTT AGCAGATTCA
AAAGCACCCA CAAAAGAACG TTGGATGACC GAGCATTATA CCAACAGTGA TGCGAATTCT
TCCGATCTAT GGCCGTCTGC GAACGATGTG TCGTATGAAA TTTACAGGTG TATGGTGGAA
GGCCAAATGA GTGTATACAC CTGGTGGTAT ATACGCAGGC AGTATGGCCC TATGAATGAA
AACGGAACAA TCAGCAAACG CGGTTATTGC ATGGCGCAAT ATTCTAAGTT TATCCGTCCG
GGTTACAAAC GGGTTGATGC TACTAAAAAT CCTGCTACAG GAGTATATAT TTCTGCCTAC
AAAAAAGGAG ATGATGTAGT GGTGGTTGCT ATTAATAGAA GCACCTCTTC ACAAACAATT
ACACTTTCTG TTCCCGGAAC AAAAGTTACT ACCTGGGAAA AATATGTAAC ATCGGGCAGT
AAAAGTTTAG CTAAAGAAGC GAATATAAAT TCAAGCACCG GCTCTTTTCA AATTACCCTT
GATCCTCAAA GTACAACTTC ATTTGTAGGT ACTGCTCCGG TTATTACCAC TCCTTCGCCG
GTAGTATCGC TTACCGCACC TGTAAACAAT ACAGTTTATA CAGAAGGTGA TAATATAACG
ATCAATGCCA CGGCAACGAT CACAAGCGGG AGCATTTCCA AAGTAGAATT TTATAACGGA
ACAACGTTGT TAGGTACAGA TGCAAGTTCA CCATACAGCT ATACAATCAC AGCAGCAGCA
GCAGGAACAT ATCCGGTCAC TGCCAAAGCA ACGAGTGCAG CCAATGCAGT AACAACGAGC
ACGGCAATAA ACATTCAGGT AGCAAAACCT ATTTACCAGA CCGGTTCTGC ACCCACAATC
GATGGAACCG TTGACGGCTT GTGGAGCAAT TTTCCATCCA CAGGTATCAC AAAAAACAAT
ACCGGTACGA TCAGCTCAGG TACAGATCTG TCGGGTAACT GGAAAGCGAT GTGGGATGCG
TCTAATCTGT ATGTGCTTGT TCAGGTAACC GATGATGTGA AGCGCAACGA TGGTGGAACG
GATGTGTACA ACGACGATGG CGTTGAAGTA TACATTGATC TGGGCAATAC CAAAGCAACG
ACATACGGCA CCAACGACCA GCAGTACACG TTCCGCTGGA ACGATGTTAC AGCGGCCTAC
GAGATCAACG GACATCCGGT AACAGGAATA ACCAAAGGCA TCAGCAATAC AGCAACCGGT
TATATTGTGG AGGTGAGCAT CCCGTGGAGC ACCATTGGCG GCACTGCTTC ATTAAATTCA
TTCCAGGGCT TTGAAGTCAT GATCAATGAT GACGATGACG GAGGAGCAAG AGAAGGTAAG
CTTGCCTGGG TTGCGTCTAC AGATGATACG TGGAGCAATC CGGCTTTAAT GGGAACAGTT
GTATTAAAAG GATTGAATTG TACGGTACCG GCAGCAGCGA TAACAGCAAG CACGGCAACC
ACATTCTGCT CCGGAGGCAG TGTAGTATTG AATGCAGGTA CAGGCACCGG ATACAGCTAT
GTATGGAAGA ACGGAGCAGC AACAATAGCA GGAGCGACAA ATTCAGGTTA TACAGCCACC
GCATCCGGCA GTTATACGGT AACAGTAACA AACCCGGGCG GCTGTTCAGC AACCTCAGCA
GGGACTACGG TGACGGTAAA TGCCTTACCG GTTTTAACGC AGTATGCGCA GGTAGATGGC
GGAACCTGGA ATCAGGTATC AGGCGCAACG GTGTGTGCTG GCTCTTCGGT TGTACTGGGT
CCTCAGCCGA CAGTAAATAC AGGCTGGAGC TGGACAGGTC CGAACGGTTA CAGTGCATCG
GCCAGAGAGC TTAGGCTTAC ATCAGTACAA ACAAATCAGG GCGGTGTTTA TACGGCAAGT
TATACAGATG GAAATACGTG TAAATCAACT TCTGTATTTA CGTTAACGGT AACTGCACTA
CCGGCCGCAG CGATTACGAC AAGTACACCG ACAACATTCT GCGCAGGCGG CAGCACAACA
CTGACAGCAG GTTCAGGTGC ATCCTACAAA TGGATGAACG GCACGGTCGC AATCACAGGA
GCAACCGCAC AGACCTATAC CGCAACAGCC GCCGGAAGCT ATACGGTTGA AGTAACGAAT
GCGGGTAACT GCAAAGCTAC TTCAGCAGCA ACAGTAGTAA CAGTAACTGC ACTGCCAACT
GCTACAATCA CAGCAACTGG TTCAACAACG ATTCCTCAGG GCGGAAGTGT AGCATTACAG
GCGAATGCAG GTTCAGCTTT GACCTACAAA TGGTTCAACG GCACGGTCGC AATCACAGGA
GCAACCGCAC AGACCTATAC CGCAACGACC GCGGGAAGCT ATACGGTTGA AGTAACAAAT
GCGGGTAACT GCAAAGCAAC TTCAGCAGCA GCAACGGTAA GCGTGGTTGC AAATCAGCCA
TCTGTTATTA CAATTACTTC ACCGGCACCG AATGCTGCAG TAACAGGAGC GATCGATATT
TCGGTGAATA TCACAGATGC GGATGGTAGC ATAACCCTTG TAGAGTTTTT AGCAGGCGAT
GATGTAATCG GCACAGCAGC AGCAGCGCCG TATACGTACA CATGGGACAC TCCAACGGCA
GGATCTCATA CGATTACGGT TCGGGTAACA GACAGTAACG GAGGCGTCAC AACTTCGGCA
CCGGTAACAG TTACATCGGA ATCCATCACA ACAGGCGTGC AGGCATTGAA TACATTGAAT
GCAGCTGTAT ATCCGAATCC ATCAAACGGC ATCGTATTTA TTGATACAGA TGCAGACTTA
TCAGATGCAA GCTTTACACT GATAGATGTG TTGGGTAAAG AAGGAACTGT TTTTTCAACA
GCAACCGGCA ACGGAGCGAT GATAGATGTG AGCAGTCTGG CGGGTGGCAC TTATGTGCTG
ATCGTTAAAA AAGATACTTC AGTGATTCGG AAAAAAATCA CTGTAATCCG GTAA
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| Protein sequence | MKKLFTVLFY LSTCLVWAQT STVNLTSEKQ YIRGFGGINH PEWAGDMTAV QRTTAFGNGA
GEMGLTVLRI FVNDDKTQWN KALATALRAQ QLGATIFATP WNPPASMCET ITRNNRQEKR
LKPGSYSAYA QHLIDFNNYM KNNGVNLYAM SFANEPDWGF DWTWYSADEV YNFTKNIAGT
LRVNGIKVIT AESFSYNKSY YDKVLNDPTA LSNIDIIGCH LYGSDANSPV SVFNYPLADS
KAPTKERWMT EHYTNSDANS SDLWPSANDV SYEIYRCMVE GQMSVYTWWY IRRQYGPMNE
NGTISKRGYC MAQYSKFIRP GYKRVDATKN PATGVYISAY KKGDDVVVVA INRSTSSQTI
TLSVPGTKVT TWEKYVTSGS KSLAKEANIN SSTGSFQITL DPQSTTSFVG TAPVITTPSP
VVSLTAPVNN TVYTEGDNIT INATATITSG SISKVEFYNG TTLLGTDASS PYSYTITAAA
AGTYPVTAKA TSAANAVTTS TAINIQVAKP IYQTGSAPTI DGTVDGLWSN FPSTGITKNN
TGTISSGTDL SGNWKAMWDA SNLYVLVQVT DDVKRNDGGT DVYNDDGVEV YIDLGNTKAT
TYGTNDQQYT FRWNDVTAAY EINGHPVTGI TKGISNTATG YIVEVSIPWS TIGGTASLNS
FQGFEVMIND DDDGGAREGK LAWVASTDDT WSNPALMGTV VLKGLNCTVP AAAITASTAT
TFCSGGSVVL NAGTGTGYSY VWKNGAATIA GATNSGYTAT ASGSYTVTVT NPGGCSATSA
GTTVTVNALP VLTQYAQVDG GTWNQVSGAT VCAGSSVVLG PQPTVNTGWS WTGPNGYSAS
ARELRLTSVQ TNQGGVYTAS YTDGNTCKST SVFTLTVTAL PAAAITTSTP TTFCAGGSTT
LTAGSGASYK WMNGTVAITG ATAQTYTATA AGSYTVEVTN AGNCKATSAA TVVTVTALPT
ATITATGSTT IPQGGSVALQ ANAGSALTYK WFNGTVAITG ATAQTYTATT AGSYTVEVTN
AGNCKATSAA ATVSVVANQP SVITITSPAP NAAVTGAIDI SVNITDADGS ITLVEFLAGD
DVIGTAAAAP YTYTWDTPTA GSHTITVRVT DSNGGVTTSA PVTVTSESIT TGVQALNTLN
AAVYPNPSNG IVFIDTDADL SDASFTLIDV LGKEGTVFST ATGNGAMIDV SSLAGGTYVL
IVKKDTSVIR KKITVIR
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