Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2028 |
Symbol | mntD |
ID | 4184553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2361670 |
End bp | 2362551 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638072031 |
Product | Mn2+/Zn2+ ABC transporter, permease |
Protein accession | YP_678636 |
Protein GI | 110638427 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.535129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATT TATACATCAT CCTCACCGGC ATACTGGTTG CCGTTTCGTG CAGCATCTTA GGCACCTTTC TGGTATTGCG TAAGATGGCC ATGGTTGGCG ATGCCATCTC GCATGCGGTA TTGCCGGGTA TTGTACTTTC TTTCTTCATC ACCGGCAGCC GCGATTCCAT CTGGATGCTG GTCGGTGCCG GACTGATGGG TATATTTACC ACACTTATTA TTGAGTGGCT GCACAAGAAA ACCAAACTGC AGGAAGATGC TTCCATCGGC GTAACATTCA CCTTTCTGTT TGCACTGGGC GTACTGCTCA TCTCCTACTT TGCCGAAAAT ATTGATCTGG ATCAGGAGTG CGTATTGTAT GGAGAGATTG CGTATGTACC GCTCAACACA CTTCTGATCG GCGGAGTGGA AATACCCAAG GCAATTGTAA TGCTTGCGGT TGTGCTGATT CTTATAACAG CAATTATCTT TTTCTTTTTT AAGGAATGGG TACTTACAAC ATTTGATGCG CCTTATGCAG CATCTATTGG TATGAGTACG GTGTTCTGGA ACTACCTGCT TATGTCTATG GTATCCTTTA CAACCGTTGC ATCTTTTGAA TCGGTTGGGG CTATTCTGGT TGTTGCCTTT TTAGTGGTAC CGGCGGCGGC GGCTTATTTA GTTACAGAGT CTTTACGTAA TACCTTATTC CTGGCCATTA TCTTCGGTAT CCTGTCGTCT GTGATCGGCT ACTACAGTGC CTCTGCGCTG GATGTTTCTA TATCTGGCGC CATGGCAGCA GCGGCAGGCT GTATCTTCAT CATTTGTTTT ATTATTCAGC TGATTACAAA ACGCATCACA TCTTCGCCTT CTATTATTGA TCCGAAAGAA TCTGTGGGCT GA
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Protein sequence | MNDLYIILTG ILVAVSCSIL GTFLVLRKMA MVGDAISHAV LPGIVLSFFI TGSRDSIWML VGAGLMGIFT TLIIEWLHKK TKLQEDASIG VTFTFLFALG VLLISYFAEN IDLDQECVLY GEIAYVPLNT LLIGGVEIPK AIVMLAVVLI LITAIIFFFF KEWVLTTFDA PYAASIGMST VFWNYLLMSM VSFTTVASFE SVGAILVVAF LVVPAAAAYL VTESLRNTLF LAIIFGILSS VIGYYSASAL DVSISGAMAA AAGCIFIICF IIQLITKRIT SSPSIIDPKE SVG
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