Gene CHU_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2028 
SymbolmntD 
ID4184553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2361670 
End bp2362551 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content46% 
IMG OID638072031 
ProductMn2+/Zn2+ ABC transporter, permease 
Protein accessionYP_678636 
Protein GI110638427 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.535129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATT TATACATCAT CCTCACCGGC ATACTGGTTG CCGTTTCGTG CAGCATCTTA 
GGCACCTTTC TGGTATTGCG TAAGATGGCC ATGGTTGGCG ATGCCATCTC GCATGCGGTA
TTGCCGGGTA TTGTACTTTC TTTCTTCATC ACCGGCAGCC GCGATTCCAT CTGGATGCTG
GTCGGTGCCG GACTGATGGG TATATTTACC ACACTTATTA TTGAGTGGCT GCACAAGAAA
ACCAAACTGC AGGAAGATGC TTCCATCGGC GTAACATTCA CCTTTCTGTT TGCACTGGGC
GTACTGCTCA TCTCCTACTT TGCCGAAAAT ATTGATCTGG ATCAGGAGTG CGTATTGTAT
GGAGAGATTG CGTATGTACC GCTCAACACA CTTCTGATCG GCGGAGTGGA AATACCCAAG
GCAATTGTAA TGCTTGCGGT TGTGCTGATT CTTATAACAG CAATTATCTT TTTCTTTTTT
AAGGAATGGG TACTTACAAC ATTTGATGCG CCTTATGCAG CATCTATTGG TATGAGTACG
GTGTTCTGGA ACTACCTGCT TATGTCTATG GTATCCTTTA CAACCGTTGC ATCTTTTGAA
TCGGTTGGGG CTATTCTGGT TGTTGCCTTT TTAGTGGTAC CGGCGGCGGC GGCTTATTTA
GTTACAGAGT CTTTACGTAA TACCTTATTC CTGGCCATTA TCTTCGGTAT CCTGTCGTCT
GTGATCGGCT ACTACAGTGC CTCTGCGCTG GATGTTTCTA TATCTGGCGC CATGGCAGCA
GCGGCAGGCT GTATCTTCAT CATTTGTTTT ATTATTCAGC TGATTACAAA ACGCATCACA
TCTTCGCCTT CTATTATTGA TCCGAAAGAA TCTGTGGGCT GA
 
Protein sequence
MNDLYIILTG ILVAVSCSIL GTFLVLRKMA MVGDAISHAV LPGIVLSFFI TGSRDSIWML 
VGAGLMGIFT TLIIEWLHKK TKLQEDASIG VTFTFLFALG VLLISYFAEN IDLDQECVLY
GEIAYVPLNT LLIGGVEIPK AIVMLAVVLI LITAIIFFFF KEWVLTTFDA PYAASIGMST
VFWNYLLMSM VSFTTVASFE SVGAILVVAF LVVPAAAAYL VTESLRNTLF LAIIFGILSS
VIGYYSASAL DVSISGAMAA AAGCIFIICF IIQLITKRIT SSPSIIDPKE SVG