Gene CHU_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2024 
Symbol 
ID4184549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand+ 
Start bp2357499 
End bp2358155 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content41% 
IMG OID638072027 
ProductMn-dependent transcriptional regulator 
Protein accessionYP_678632 
Protein GI110638423 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACCC ACACCGAAGA AAACTACATC AAAACAATTT ACCATTTGTC CGGTGAGGAT 
AACCGGGATG TATCTACGAA CGGAATTGCT GAAGTATTAA AGACCAAACC TGCTTCCGTT 
ACGGATATGC TTCGTAAACT TTCGGAAAAA TCTTTTATCA ATTACATCAA ATACCAGGGG 
GTAACACTTA CTAAAAAAGG CAAAAAAGAA GCCTTGCAGA TTATCCGTAA GCACCGTTTG 
TGGGAAGTAT TTTTGGTAGA TAAGCTAAAG TTTCATTGGG ATGAAGTACA CGATATAGCT 
GAGCAGCTGG AACACATTCA ATCGAGCGTA TTAATAAGCC GGCTGGATGA ATTTCTGGGC 
AATCCGGCTT TTGACCCGCA TGGTGACCCT ATTCCCGATC AGCAGGGAGA GATTACCGTG 
CGGAGGAAGT ACCTCTTATG CGACATGTCT GTCGGGTTTA AAGGAATTGT TGTGGGCATG 
CTTGAAACTT CCCCGGCATT TCTTCAATAC TTAGATCGCT TAAATATTTG TCCGGGTGCA 
AAAATTACCA TTAAAGACCG CATTGTGTTT GATGGTTCAC TTGAAATTGT ACTCCAGGAA 
AGCAAACATC TGGTTATTTC TTATGAAGTA GCCAAAAACC TATACGTTAC CGATTAA
 
Protein sequence
MLTHTEENYI KTIYHLSGED NRDVSTNGIA EVLKTKPASV TDMLRKLSEK SFINYIKYQG 
VTLTKKGKKE ALQIIRKHRL WEVFLVDKLK FHWDEVHDIA EQLEHIQSSV LISRLDEFLG 
NPAFDPHGDP IPDQQGEITV RRKYLLCDMS VGFKGIVVGM LETSPAFLQY LDRLNICPGA 
KITIKDRIVF DGSLEIVLQE SKHLVISYEV AKNLYVTD