Gene CHU_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2021 
Symboldps 
ID4184546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2354611 
End bp2355087 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content39% 
IMG OID638072024 
ProductDNA-binding protein; DPS family protein 
Protein accessionYP_678629 
Protein GI110638420 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGT TAAATTCAAT CGGGCTGGAT GAGCAGTTGG CTAAAGAATT AGCAGAAAAA 
TTGAATGATC TACTCGCGAA TTATTCGATC TTTTATATGA ATACGCGTGG GTATCACTGG
AATATTTCCG GAGACAAGTT TTTTGAATTG CATCTTAAAT TTGAAGAATT GTACAATAAT
CTTGTACTGA AAATAGATGA AGTTGCAGAA CGTGTATTAA CGCTTGCACA TACACCGATG
CATTCGTATG CCGATTATCT GGCCACATCT AACATTGCAT CGGTAAAAAA CGTGACGGAA
GGGAAAGTAG CTATTCAGCA TATTCTGGAT GCATTTACGG TAATCATTAC CAAGCAGCGT
GATCTGTTGG AATTGTCTGC TAAAGCCAAT GATGAGGGAA CAAATGCATT AATGAGCGAC
TATATCCGGG AGCAGGAGAA GCTGGTCTGG ATGTATCGTG CATACTTAGG AAAATAA
 
Protein sequence
MSKLNSIGLD EQLAKELAEK LNDLLANYSI FYMNTRGYHW NISGDKFFEL HLKFEELYNN 
LVLKIDEVAE RVLTLAHTPM HSYADYLATS NIASVKNVTE GKVAIQHILD AFTVIITKQR
DLLELSAKAN DEGTNALMSD YIREQEKLVW MYRAYLGK