| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2012 |
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| Symbol | |
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| ID | 4187113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2346718 |
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| End bp | 2348187 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638072015 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_678620 |
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| Protein GI | 110638411 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0246566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAACA GTGCAACTGT CATTTATCAG AATCTATTAA AATCTACTCC TAAAAAAGCA
AGCGAATATT ACTATTACCT GGGAGATATA TGCTGGAGAA AAGAGAAAAC CGATTCTGCA
AAGTATTATT TCATGGAAGG TATTAAAACG GATGAAACCT ATGCAATGAA CTATGTAGGT
ATCGGTATCA TTACGATGAA ATCAAATGCT ACAGAAGGAC AGCGCAGTTT TGATAAAGCA
TTGCAGATGA CCTCTCAAAA GAATTCTCAG GTATTAAATG CAATTGGTGA ATACTATATC
CTGGAAGCAG ATAAAGCGGA ATTGCCTAAA GGAATAGCAC TGTTGAAAAA ATCAACAGAG
ATTGATGCTA AAAACGCCAT GTCCTGGATC TTGTTAGGTG ATGCATACGG CAAGCAGGCT
GAGGGTTCTA AACAAGCGGA GAGTTATGGC AAAGCAGCAA ATTTATTTCA CTCAGTACCG
TTGTTAAAAA TGAAGTACGG AAAAATGTAT GCAGCTGCCC GCAACAAAGA TCTTTCTATT
AAGTATTACA ACGAAGGACT GGCTGCAGAT CCTACCTATG GCCCCATCTA CAGAGAATTA
GGTGATCTGT ACAACCGTTT CAGACAATAT GACCTGGCTA TTCAGAATTA TAAAAAGTAC
CTGACCTATA TTGATTCAAA CGATGACGTT GAATTCAGAT ATGCTGATTT CTTATTTAAG
AATAACAACT ACGCAGAAGC AATTGAGGTA TTCAATAAAC TGGAAGCTAA AAAATACAAC
AGCCCATACA TATATAACAG ACGTGCCGTT TGTTACTATG AATTAGCGAA ATATGATCTT
GCACAGAAAG ATATTGAAAC CTATTTTTCT AAAGTGAATG CAACAAAAGC GAAGTCGGCC
GACTTTGAAT ACTATGGTAA AATATTGATG AAGAAAGGGC AGGACTCACT TGCTATACAG
CAATACCAGG CAGCCGTTGA CCGTGATACA ACACGTCTGG ATATGTATGG TCAGATAGGC
TCTTATTTCT ACAACAAAGG AAATTTCCCG CTGGCGATTC AATACATGAG TAAGCAGATA
CGACCAACGA CAACAGACCC CAAAGTATTT TATGAATTGG GCCAGGCATA TTATTACAAC
AAAGAATATG TAAAAGCAGA TTCCAGTTTT GTAAAAGTAC TGGAATTAAA GCCAAACATT
TATATTGGAT ATTTATGGCG TGCACGTGCC AATGCCGCAC AGGATCCTGA TACAAAGCAG
GGTTTAGCTA AACCGTATTA TGAAAAATTA ATAGAAGTAT GCGCACCGGG CGGAGCGAAA
TACAAGGATG AGTTGATTGA AGCGAACGAA TACATTGCTT ATTATTATAC CATTAACCGT
GATAAAGTGA AGGCCGATGC TGCATGGAAA AATATTCTGG CACTTGACCC AACAAATAAA
AAAGCAATTG ATGGATTGAA AATGAAATAA
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| Protein sequence | MYNSATVIYQ NLLKSTPKKA SEYYYYLGDI CWRKEKTDSA KYYFMEGIKT DETYAMNYVG
IGIITMKSNA TEGQRSFDKA LQMTSQKNSQ VLNAIGEYYI LEADKAELPK GIALLKKSTE
IDAKNAMSWI LLGDAYGKQA EGSKQAESYG KAANLFHSVP LLKMKYGKMY AAARNKDLSI
KYYNEGLAAD PTYGPIYREL GDLYNRFRQY DLAIQNYKKY LTYIDSNDDV EFRYADFLFK
NNNYAEAIEV FNKLEAKKYN SPYIYNRRAV CYYELAKYDL AQKDIETYFS KVNATKAKSA
DFEYYGKILM KKGQDSLAIQ QYQAAVDRDT TRLDMYGQIG SYFYNKGNFP LAIQYMSKQI
RPTTTDPKVF YELGQAYYYN KEYVKADSSF VKVLELKPNI YIGYLWRARA NAAQDPDTKQ
GLAKPYYEKL IEVCAPGGAK YKDELIEANE YIAYYYTINR DKVKADAAWK NILALDPTNK
KAIDGLKMK
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