| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1996 |
|---|
| Symbol | |
|---|
| ID | 4186087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 2331873 |
|---|
| End bp | 2333759 |
|---|
| Gene Length | 1887 bp |
|---|
| Protein Length | 628 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638071999 |
|---|
| Product | sulphatase |
|---|
| Protein accession | YP_678604 |
|---|
| Protein GI | 110638395 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.745737 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGTAG CGCTATATCG TTTTCTTTTT ACCCGCTTTC TTTTCTTGAT GTTTCTCTTC
AGTCTTTGCA GACTGTTGTT TTTTCTGTTT TATGCAGATC AATATGAAGC GTGTACAACA
GGCGAAATAC TGCATGCCTT TGTATTGGGG TTACGTTTTG ATATTTCCAT CCTGCTTGCA
TTTAATGTTG TATTGGTGCT GCCTCTGGCA TTGGGCCGTT TCTTTGACAT TCCAAAAATT
TTATTCTTCC TCGGAAAAAT TCTTTTTGTT CTTGTTAACG GCATACTGAT CTGTATCAAC
CTGATAGATC TGGAATATTT TTCATTTACA GGAAAACGTA CCGGTATTGA GATACTGGGA
ATAAAAGATG ACATCGAAAA CCAATTCAGC CAACTGCTTA CCAATTACTG GCACATAAGC
TTACTGGGCT TTATGCTTTT CTTGTGGCTG CTGCTGCGTA CACTCAGATT AGCATACAAG
CCGGTACTGT CGGCACGGCC CAAAATATAT TTTACGATTG GTTATGCGTT ATTTATCTGC
ATCGCTGTGT TGGGCATACG TGGCGGACTA CAGTTAAAGC CCTTACGTCC GAACATTGCC
TTTTCAATCG AACCAAGCAA ACTTGGAAAT GTTGTATTGA ATACGCCCTT CAACATATTT
ATGACCATAG GCATTGCACC TATTGAACCT GTAAAGTACT TTAATGACCC AACGGAAGTC
TCTTCGATTT TATCTGAATG GAACGCGCAG CAAAAAAACA CACTGCCCAA TCATACAACG
CCGCAGAATG TTGTGATTAT TATTTTGGAA AGTTTTTCTT CCGAGTATAT GGGAATCAAC
AATCCTTATG CCGGTTACAC GCCTTTTTTA GATTCACTCG CTAAAACCAA TTTATATTTC
CCGCATAATT TTGCAAATGG AAAAGTCAGC ATGGTGGCTG CACCTTCTAT CCTTGCTTCT
ATTCCGGGCT TAATGGAAGA GCCTTATATT ACTTCGTTGT ATCAGACGAA TACGCTTATT
GGTTTAGGTG CTCCGCTGCA GGATAAGGGA TACCACACTT CTTTCTTTCA CGCGGCACAA
AACGGTTCCA TGGGCTTTGA TGCCTTTACA AAAAATGCAG ACTTCGCGCA TTATTATGGT
TTAAACGAAT ACAAAGGAAA CAAAGAAGAT TATGACGGTA ACTGGGGCAT TTATGACGAA
CCATACCTTC AGTACTTTAA GAACATGTTA AATACCTTCC CCGAACCTTT TATTTCAACG
GTATTTACAA TCAGTTCCCA CCAGCCGTAT TCCCTGCCTG AAGCATTTAA AAATACCTTT
CCCAAAGGTT CACTGGAAAT ATATCCATCA ATCGGCTATA CAGATTATGC GCTACGTACG
TTCTTTGAAC AGGCTAAAAA AGAAAAGTGG TATGCAAATA CCTTGTTTGT GATCACCGCG
GACCACACAC AGATGCATGA TAAAAAATCC TATATGAATA CACGCGGCGA TTATGCTATT
CCATTAATAT TTTTTCATCC GAATGAAAAA CTTCATGCAG ATACTTCACT GGTAGCCAGT
CAGATTGATA TCATGCCAAG CATCCTCGAT TATTTACATG TCCCGAATCC GAACGCGGCA
TTGCTGGGCC AATCTGTATT TGGAAAACAG ATCGGCCATG ATTACGCCGT GAATTTTTCA
AATAACACGT ACCGGGTATT TCTAAAAGAA AATTATATTG AAGGAAGTGC GGATAAATCT
TTTGTGATCA AAGATTACAA CGACAGATCG CTGCGTGCTG CAAATGAAAA GGAGAAAAAA
TTTATTGAAG CGATCATTCA ATATTATACA AACGGCATGA TCAACAATAC CTATTATAAC
TGGCCGGTTA CAAAAGCACC TATTTAA
|
|---|
| Protein sequence | MVVALYRFLF TRFLFLMFLF SLCRLLFFLF YADQYEACTT GEILHAFVLG LRFDISILLA
FNVVLVLPLA LGRFFDIPKI LFFLGKILFV LVNGILICIN LIDLEYFSFT GKRTGIEILG
IKDDIENQFS QLLTNYWHIS LLGFMLFLWL LLRTLRLAYK PVLSARPKIY FTIGYALFIC
IAVLGIRGGL QLKPLRPNIA FSIEPSKLGN VVLNTPFNIF MTIGIAPIEP VKYFNDPTEV
SSILSEWNAQ QKNTLPNHTT PQNVVIIILE SFSSEYMGIN NPYAGYTPFL DSLAKTNLYF
PHNFANGKVS MVAAPSILAS IPGLMEEPYI TSLYQTNTLI GLGAPLQDKG YHTSFFHAAQ
NGSMGFDAFT KNADFAHYYG LNEYKGNKED YDGNWGIYDE PYLQYFKNML NTFPEPFIST
VFTISSHQPY SLPEAFKNTF PKGSLEIYPS IGYTDYALRT FFEQAKKEKW YANTLFVITA
DHTQMHDKKS YMNTRGDYAI PLIFFHPNEK LHADTSLVAS QIDIMPSILD YLHVPNPNAA
LLGQSVFGKQ IGHDYAVNFS NNTYRVFLKE NYIEGSADKS FVIKDYNDRS LRAANEKEKK
FIEAIIQYYT NGMINNTYYN WPVTKAPI
|
|---|
| |