Gene CHU_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1993 
Symbol 
ID4186084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2329638 
End bp2330450 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content38% 
IMG OID638071996 
Producthypothetical protein 
Protein accessionYP_678601 
Protein GI110638392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.116886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAGA AAATAAGCGT TTTAATGGTT CTTGCTGCAA GCACATTAAG TGTTTCAATG 
GCTCAGGTTT CCAATGATTT CAACTTTCCG GTTGATAAAT TTGATTTTGG TGTAATAACT
GAAGGTGAAA AAGCCAGACA CACATTTGAA TTTTTCAACA CAGGAAAAGA TACCATCTTA
TTGAAATCTG AAAATGTACG TGCTTCCTGC GGTTGCACAA CTCCTTCATT TTCAACGGAA
GCAATTTTAC CGGGTCAGAA AGGTGTCATC ACAGCCGAAT TTAATTCTCA AGGCAGACCA
GGTACGTTCC AGAAAACAGT TACCGTATAC TACAAAGAAC AGGTAGCTAA AATGCTTAAT
ATCAAAGGTA TTGTAGAACC TGCTACACCG GAAGTTGCAC ATTCAGAAGC AGAATTGAAA
AAAGCAGCTA AAATTTCTGT TGACAAACAT CAGGTTAATC TTGGTAAAGT TGAAAGAGGT
CAGCAAAGCA GCTATTCGCT GAAAGTAACA AATCCGGGTA AAGATACCTT GTTTGTTACT
AAAGCACAGG CAGCTTGCAG CTGTATTACA TACAAACTGA TCAAAGAAAA ATCTACCGAA
GAAGTAAATT ATATTTTACC GGGTAAATCT GCTACCATGA AACTTGTATA CAGCCCCTCT
GCAGACGGTT ACAACAGAGA TATCCTTACG TTGTATACCA ACGATATTAC AACACCACGT
ACAGCTATTG TAGTAGAAGC TGAAGTTGTT GAATCGTTAC AGCAAAAAAG TATTCTTCAG
GAAGGCAGCG GCGGCGCTCC ATTCTCCAAA TAA
 
Protein sequence
MFKKISVLMV LAASTLSVSM AQVSNDFNFP VDKFDFGVIT EGEKARHTFE FFNTGKDTIL 
LKSENVRASC GCTTPSFSTE AILPGQKGVI TAEFNSQGRP GTFQKTVTVY YKEQVAKMLN
IKGIVEPATP EVAHSEAELK KAAKISVDKH QVNLGKVERG QQSSYSLKVT NPGKDTLFVT
KAQAACSCIT YKLIKEKSTE EVNYILPGKS ATMKLVYSPS ADGYNRDILT LYTNDITTPR
TAIVVEAEVV ESLQQKSILQ EGSGGAPFSK