| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1988 |
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| Symbol | atoS |
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| ID | 4186079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2321734 |
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| End bp | 2323881 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638071991 |
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| Product | sensor protein for response regulator AtoC |
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| Protein accession | YP_678596 |
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| Protein GI | 110638387 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.431904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA ATGTTTTTTT TGTGCTCGTA TTATTTTTAA CATTCTGCTC TTATTCAAAA
ACGATTATCT ATCAACAGCA TTCAGGTAAT ATTCCTATAG GAGGTTATTC AGAAATTTTC
ACAGATCCCG GTAATACACA CACCATTCAG GATGTAATCA AAACAGGTCA ATTTGTTGCT
GCAAACAGTT CTACACCTAA TTTAGGAATT TCTCCAAATG CTTTTTGGGT GAAGTTTACG
ATTCAGAATC AATCTGATGC AGATAAATTA CTGTTAGAAT ACGATCTGCC ATTCATAGAT
GAAATAAGCG TATACGAAGT TGATAAGGAT AAGAATGAAG TAACGGGCGT TCATACTTCA
GGAGACAAGT ATAATTTTAG CAATAGAGAG TATGATTATC AGAATTATAT TTTTTCAATC
GCTATAAAAA AAAATGAAAT AAAGGATATC TATTTATTTA TCAAAAGCGG AGAACAAATC
GTACTGCCGA TTATGCTTGG TTCAACAAAA TCCATATTGC AGGCTAATCA TACCAAAGAT
ATTATCTTTG GCATATATAG CGGAATCATA CTGGTTATGC TTTTTTATAA TTTGTTTATA
TATAGTACAC TTAAAGATTC TATTTATCTG AAGTATGTAG TCTATATTAC AGGTATTGGC
ATGGCGCAGG CATCCTTGAT GGGGTATTCG TTCCAGTATT TATGGCCTGA ATCTCCGTTG
ATGGCAAATC AAAGTGTGTA TTTATTTTCC TGTCTGGCAA GTATCGGTGC ATTGGAATTT
GTAAAACCTT TTTTGCAGAT AAAAAAACAT GCTCCTTTAT TATATAAAAT ATCTTTTCTG
TTTACTTTTG CTTATATACT CACGGCCATT TTATCTTTAA CCGGGTATTT CAATATCAGC
TATTTTTTAG TTCTGACAAA TGCTGCATGG ATATGTATAT ATATGCTTCT TGTTGGCATT
GTCATATTGA AAAAGCGCTA TAAACCTGCA CTGTTCTTTT TAATAGCATG GTCTCCAATG
TTAATTGGAA TAATCATTTC TGTGTTAAAA GACATTAACC TGTTACCTGC AAATAATTTT
ACCAATTATA CAATGCCCGC CGGCTCTGCA TTAGAAGTTA TTCTTTTATC ATTTGCTTTA
GCTGATAGAA TAAATATATT AAAAAAAGAA AAAGAAGCAT CTCAGGCAAA GGTTCTCGAT
GCCCTATTGC AGAATGAATT AATAATCAAA AATCAGAATG CGTTATTAGA AAAAAAAGTA
GAAGAGCGTA CGAAAGAATT AATAGAAACC AATCAGGAAT TGTCTGCTAC AATTGCAGAT
TTGAAACAAA CGCAAACGCA ACTTGTAAGT TCTGAAAAAA TGGCTTCTCT CGGTCAATTA
ACAGCTGGTA TAGCGCATCA AATAAATAAC CCGATTAATT TTGTTGTATC TAATGTCAAG
CCATTAAAAA AAGACATCGA AGATATTTAT GAATTGATAC AGAAATATGA CAATATAGAT
CCAGTATCGA GTTTCCAGAA TAAAATAACA GAGATCAATT CTTTTAAAGA TGAAATTGAT
TATGCTTATC TGAAAAAGGA AATCGGAAGT TTGCTGAAAG GCATTGAAGA TGGAGCAGAG
CGGACGGCCG ATATAATACA GGGCTTAACC GTATTCTCCA GAACAGATGA AAATATTCTA
AAGCGTGCAG ACATAACCGA AGGGATTAAC TCCAGTGTAA CACTTCTTAA TACACAATTT
TCAGAAAGCG GTATCGAGCT TATCAAAAAC ATTGAACCGC TTCCGCTGAT AGAATGTTTC
CCCGGTAAAT TGAACCAGGT ATTTATGAAC ATTTTAAATA ATGCTGTTTT TTCTATTAAA
GAACATAAGG AACGTAAAGA AAACGGACAG CTTATTATTA CGGCGCATGC CGATAATTAT
ACTGTTTATA TAAGCTTTAA AGACAATGGT ATGGGTATGC CAGACTATGT AAAAGCAAAA
GTTTTTGAAC CATTTTATTC AACGAAAGAA GCGGGCAAAG GTGCGGGCTT AGGAATGTCT
ATTGCTTTAT CGATTATTAA AGATCATATG GGAAGCATTA AATTTCATAC CGAATATGGT
AAGGGAAGTG AATTTATTGT TACGCTTCCT ATAAATTATA CTAAATAG
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| Protein sequence | MKKNVFFVLV LFLTFCSYSK TIIYQQHSGN IPIGGYSEIF TDPGNTHTIQ DVIKTGQFVA
ANSSTPNLGI SPNAFWVKFT IQNQSDADKL LLEYDLPFID EISVYEVDKD KNEVTGVHTS
GDKYNFSNRE YDYQNYIFSI AIKKNEIKDI YLFIKSGEQI VLPIMLGSTK SILQANHTKD
IIFGIYSGII LVMLFYNLFI YSTLKDSIYL KYVVYITGIG MAQASLMGYS FQYLWPESPL
MANQSVYLFS CLASIGALEF VKPFLQIKKH APLLYKISFL FTFAYILTAI LSLTGYFNIS
YFLVLTNAAW ICIYMLLVGI VILKKRYKPA LFFLIAWSPM LIGIIISVLK DINLLPANNF
TNYTMPAGSA LEVILLSFAL ADRINILKKE KEASQAKVLD ALLQNELIIK NQNALLEKKV
EERTKELIET NQELSATIAD LKQTQTQLVS SEKMASLGQL TAGIAHQINN PINFVVSNVK
PLKKDIEDIY ELIQKYDNID PVSSFQNKIT EINSFKDEID YAYLKKEIGS LLKGIEDGAE
RTADIIQGLT VFSRTDENIL KRADITEGIN SSVTLLNTQF SESGIELIKN IEPLPLIECF
PGKLNQVFMN ILNNAVFSIK EHKERKENGQ LIITAHADNY TVYISFKDNG MGMPDYVKAK
VFEPFYSTKE AGKGAGLGMS IALSIIKDHM GSIKFHTEYG KGSEFIVTLP INYTK
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