Gene CHU_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1976 
Symbol 
ID4186999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2305420 
End bp2306028 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content37% 
IMG OID638071979 
Productthiol-disulfide isomerase or thioredoxin 
Protein accessionYP_678584 
Protein GI110638375 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.575608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAA TAACCGCAAT TATTTCAACC GCTTTATTAT TTGTATTCGC TTCCTTTGTA 
ACCGATGGCG GTTATGCGGT TGGCGACAAG GCACGTGATT TTAAACTTAA GAACATTGAC
GATAAACTTT TTTCGCTTGC AGATAAAAAA GATGCAAAAG GCTTTATTGT TGTATTTACG
TGTAATCACT GTCCGTACGC CGTTAAATAC GAAGACCGTA TTGTTGCCTT GAATAATAAA
TACGCAAAGT CAGGTTACCC TGTTGTAGCG ATCAATCCCA ATGATGCAAC CGCATATCCG
GATGACAATT TCGAGAACAT GAAAAAAAGA GCTAAAAGTA AATCGTTTAC TTTCCCATAT
TTAGTAGATG ATACACAGGA AATTGCTAAA GCATACGGAG CAACAAAAAC GCCGCATGTA
TTTGTATTGA AAAAAGAAAA CGCAGATCTT GTTGTTAAAT ACATTGGTGC CATTGATGAT
AATACAGATG ATGCTTCTGC TGTAACAACT AAATATGTAG AACAGGCTGT TGATGCGTTG
CTGGCAGGTA AAGACGTTAC TACTACTTCT ACCAAAGCAA TCGGTTGTGG TATCAAGTGG
AAAAAATAA
 
Protein sequence
MRKITAIIST ALLFVFASFV TDGGYAVGDK ARDFKLKNID DKLFSLADKK DAKGFIVVFT 
CNHCPYAVKY EDRIVALNNK YAKSGYPVVA INPNDATAYP DDNFENMKKR AKSKSFTFPY
LVDDTQEIAK AYGATKTPHV FVLKKENADL VVKYIGAIDD NTDDASAVTT KYVEQAVDAL
LAGKDVTTTS TKAIGCGIKW KK