| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1961 |
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| Symbol | mscL |
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| ID | 4186984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2291146 |
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| End bp | 2291571 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071964 |
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| Product | mechanosensitive channel |
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| Protein accession | YP_678569 |
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| Protein GI | 110638360 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.171648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTTTA TTGGTGAATT TAAAGCCTTC GCCATGCGGG GCAATGTGGT AGATCTGGCA
GTCGGTGTGA TTATCGGTGG AGCATTTGGT AAAATTGTAT CTTCGATGGT TGATGATCTG
ATTATGCCGA TCGTGAGTAT TTTCATGGGC GATAAAGGTT TTAAAGATAA ATTTTTTGTT
TTCGGTAATC AGACCTTCGA AAGTCTGGCA AAAGCTAAAG AAGCCGGTGT CCCTGTATTT
GCTTATGGTA ATTTTATACA AACAGTTATT GACTTTACCA TTTTAGCATT TGTGATTTTT
TTAATGGTAA AAGGAATGAA TAACCTGAAG AAGAAAGAAG AAGCGGCAGC ACCTGCGCCT
GTACCTGCTG AACCAACAAA AGAAGAACAA CTGTTAACAG AGATCAGAGA CTTGTTGAAA
AAATAA
|
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| Protein sequence | MSFIGEFKAF AMRGNVVDLA VGVIIGGAFG KIVSSMVDDL IMPIVSIFMG DKGFKDKFFV
FGNQTFESLA KAKEAGVPVF AYGNFIQTVI DFTILAFVIF LMVKGMNNLK KKEEAAAPAP
VPAEPTKEEQ LLTEIRDLLK K
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