Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1938 |
Symbol | |
ID | 4186427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2269936 |
End bp | 2270445 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638071940 |
Product | hypothetical protein |
Protein accession | YP_678546 |
Protein GI | 110638337 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.170885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0315238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCACGT TTAAAGCAGT TATTCATAAA TATGAAAAGA ATGCAGAGAA AACTGGCTGG AGTTTTATCT ACATTCCCAT AGATGTTTCA GAAGCACTGG AACCCGGAAA CAAAAAAGGC TTTCGTGTAA AAGGTGCGTT AGATAACTTT CCGATTGAAG GTGTGTCACT TATTCCCGTT GGTGGCGGAG AATTTATTAT GCCTATCAAT GCAACCATGC GTAAAGGTAC TCATAAGGCA ACCGGAAGTA CATTAACGGT ACGCATTGAA ATTGATCCGA AAGAATACAT ATTAAATTCA GATTTTATTC TGTGCCTGGA AGATGTACCG CGTGCGTATG CTTATTTTAA AAGCCTTACA AGATCGCACC AGAATTATTT TTCGAAATGG ATCGATGCTG CAAAAACAGA ACTAACAAAA TCAAAACGCA TTACACAATC CATTCAGGCA TTAAGCATGG AATTGGGCTA TTCGGAAATG ATGCGGATGA ATAAGGGAAA TAAGTTTTAA
|
Protein sequence | MFTFKAVIHK YEKNAEKTGW SFIYIPIDVS EALEPGNKKG FRVKGALDNF PIEGVSLIPV GGGEFIMPIN ATMRKGTHKA TGSTLTVRIE IDPKEYILNS DFILCLEDVP RAYAYFKSLT RSHQNYFSKW IDAAKTELTK SKRITQSIQA LSMELGYSEM MRMNKGNKF
|
| |