| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1932 |
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| Symbol | yiaD |
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| ID | 4184281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2261289 |
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| End bp | 2262563 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071934 |
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| Product | outer membrane protein |
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| Protein accession | YP_678540 |
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| Protein GI | 110638331 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.259358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATTC GGTCAATACT CGTTACAGGT ATTATATCAA TAATGATAAC TAATGCATCT
TTTGCGCAGA AAATTGCCGC AGGCTGGGTG TATACGTATT CATTTGATGG GAATGCCTAT
GATGTAGGGC CTAACAGACT TCACGGACAA ATGATTGGTG GAGTGGAGGC AGCTTCAGAC
AGGTTCGGGA GAGAAAATAA AGCGCTTCAT TTTAATGGAT CAGACGGTTT TATCCGCATT
CCTTTTTCGG CCAATCAAAA CCTACCTGTA AGTAATTTTG CTTTTACCGT TTGGGTATAT
GTGGATAAAT ACAATGATTC TCCGTATTGG GAAAATTTAA AAACAAGCAA TTATTCACCG
ATTTTCTGTA AAACAGAAAC AGCAACGAAT TTTCAATACC GCTTTGGTGC CAGCGATAAA
GGCTTTTATT TTGATGGCGG GGAAGAAGGA AATTCAAAAG GTATATACAC AAGTAACGGT
GTAACCTTGA TGCCTGGTAA ATGGAATATG ATCGCTGTAT CCTTTAACGG GTATGTAGCT
AAATACTTTT TGAATGGACG ATTAATCGCT TGTGAAAATG TTGCCGCACA TTTTGTTTCA
AATAATCAGC CATTAATTGT AGGATGTGAT TTCCCTGGTC AGGCAAGCTA TTTTGCCGGT
AAGATGGACG ATTTCAGTAT CTGGGACAAG TTTATTTCGG AAGAAGAAGT GAAACAAATT
TATGCTGTAC AATCTAAATA TCCATTTAAT CCGCCTCCGA TAACCGTACC TGCTGTTGTA
CAGGATGAGC CGGTTAAGCC AGCAGTTATT GAGAATACAA CAGTTGTTTC AACAACAACT
ATCCTGCAGC CAGCAGATAC ATCTAAACAA ATAAAAACCA CAAAAACAGA AATCAAACCC
AAAGATGAAT CTGTTTTTGA TGTTAAAAAA GGGGATAAGA TTGTATTGAA ACACGTACTA
TTTGTGCAAA GTAAAGATGA TTTTTTACCT GAATCGTATG CAGAGCTGGA TCGTTTGGTA
GCAACAATGA ATCAGCATCC CCAAATAACG ATTGAAGTTT CCGGCCATAC CGATAATCAG
GGAAACAGAG ACTTGAATCT GAAACTTTCA GAAGAACGTG CCATCAAAGT AAAAGATTAT
CTGGTAAGCC GCGGTATAGA AGCGAAAAGA ATTAATGTAA AAGGGTATGG GCCGGATAAA
CCGATCAGTG CCAATGATAC AGAAGAACAC AGAAGATTAA ACAGAAGAGT AGAGTTTGAG
ATTATTCAAA TGTAA
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| Protein sequence | MKIRSILVTG IISIMITNAS FAQKIAAGWV YTYSFDGNAY DVGPNRLHGQ MIGGVEAASD
RFGRENKALH FNGSDGFIRI PFSANQNLPV SNFAFTVWVY VDKYNDSPYW ENLKTSNYSP
IFCKTETATN FQYRFGASDK GFYFDGGEEG NSKGIYTSNG VTLMPGKWNM IAVSFNGYVA
KYFLNGRLIA CENVAAHFVS NNQPLIVGCD FPGQASYFAG KMDDFSIWDK FISEEEVKQI
YAVQSKYPFN PPPITVPAVV QDEPVKPAVI ENTTVVSTTT ILQPADTSKQ IKTTKTEIKP
KDESVFDVKK GDKIVLKHVL FVQSKDDFLP ESYAELDRLV ATMNQHPQIT IEVSGHTDNQ
GNRDLNLKLS EERAIKVKDY LVSRGIEAKR INVKGYGPDK PISANDTEEH RRLNRRVEFE
IIQM
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