Gene CHU_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1925 
Symbol 
ID4184274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2255841 
End bp2256599 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content39% 
IMG OID638071927 
Producttranscriptional regulator 
Protein accessionYP_678533 
Protein GI110638324 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.291819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACCT CTACATTCAA CTATTCATAT GTACTACCTG AACCAGCGCT GGCAGATTTT 
GTAGAGTCTT TTTGGGTTTT AGAAAATCAT TCGGATGAAG CCAAAGAAAT TGTTGTATTG
CCCGACGGAA GCTTCGATGT ATTCTTTGGC TATTCGGTAA CAGAACCTTT TCACGTTACA
TTGTCCGGTA TTGCTACAGA ATCTACTCAA GCCATACTTG CTGCACAAAC AGTAATGTTT
GCAATCAGTT TTAAATTTTT AGCATTGGAA TATATCCTGC ACACACCGCT TGCCGGTTTA
CTCAATTCAA CAGATTATTT ACCTAATGAT TTTTTAGACA TTCAACAAGC AGACCTGAGT
GATCTGGAAT CGTTCAAAGA AAAAATTTCG TTGAAATTAA AAACGTGTTT ACAAAAAAAC
ATTGATCCCA GAAAGACAAA ACTGTCTAAG TGTATCTATG ATTCCAAAGG TACGGTTACC
ATACACCATG CTGCTGATAG CTGTGGCTGG AGCAGCAGGC AGATCAACCG GTATTTTCAG
CACTGGGTCG GAATTTCACT GAAAAACTAT TTAACTATCT TACGGTTCCG TGCATCTTTT
TCACAGATCC AAGCAGGCAA ACTTTTTCCG GAACAGCAGT ATACCGATCA GGCACATTTT
ATCCGCGAAG TAAAGAAATT TGCCGGTGTT GTTCCCAAAG AATTGAGCCG GAATAAAAAT
GACCGATTTA TACAATTTTC CATTCTGAAG AAGAAGTAG
 
Protein sequence
MSTSTFNYSY VLPEPALADF VESFWVLENH SDEAKEIVVL PDGSFDVFFG YSVTEPFHVT 
LSGIATESTQ AILAAQTVMF AISFKFLALE YILHTPLAGL LNSTDYLPND FLDIQQADLS
DLESFKEKIS LKLKTCLQKN IDPRKTKLSK CIYDSKGTVT IHHAADSCGW SSRQINRYFQ
HWVGISLKNY LTILRFRASF SQIQAGKLFP EQQYTDQAHF IREVKKFAGV VPKELSRNKN
DRFIQFSILK KK