Gene CHU_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1916 
Symbol 
ID4187134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2247666 
End bp2248415 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content40% 
IMG OID638071918 
ProducttRNA and rRNA methylase 
Protein accessionYP_678524 
Protein GI110638315 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.581034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.306888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACGA AACAGACTGT AAAATTCACT AAATCTCTTC AAAATAAGAA ATTTCGAAGA 
CTTTATAATC AATTTATTAT TGAAGGCGAG AAGTCTGTAT TAGAAGTACT TTCATCTGAT
TTTAAAATTC AAAAGCTATT AGTGACTTCT TATTTTCATG CCAAGTACAA AGAGCTACTC
GCACCGTTTT CAGGCATTAT TGAGCTTGCG GGTGATACAG AGCTGGATTC AATAGGCTCT
TTGCAAAGCA ACGATGCTGC TATCGCTGTA TGTGCCGTAA ATGAAGTGTT ATTGCCGGAA
ACCATTAAAG GTGAGTGGGT GATAGCCCTG GATAATATCA ATGACCCCGG TAATCTGGGA
ACCATTATAC GTATTGCGGA TTGGTATGGA ATCAGTAAAA TCATCTGCTC TGAAGATACA
GCAGATTTCT ATAACCCTAA AGTTATCAAT GCTTCCAAAG GTTCATTTTT GCGTGTAAAA
GTTCATTATA CGGATCTGTC AGCTTTTTTA AAGCAACAAC GTGTATCGGT GTATGGTGCA
GATCTTCATG GGGAAAATAT ACACACCGCT TCATTTAAAG AGGTAGGTAT ATTGGTTATG
GGCAATGAAG CGCATGGCAT CAGTGAAGGC GTTAAAGCAT GCATTACGCA GATGCTGACT
ATTCCAAGGT TCGGACAGGC TGAGTCGTTA AATGTTGGGA TTGCTACAGC GATATGCTGC
GACCGCATCA AATCTGCTCA GTCGGTATAG
 
Protein sequence
MLTKQTVKFT KSLQNKKFRR LYNQFIIEGE KSVLEVLSSD FKIQKLLVTS YFHAKYKELL 
APFSGIIELA GDTELDSIGS LQSNDAAIAV CAVNEVLLPE TIKGEWVIAL DNINDPGNLG
TIIRIADWYG ISKIICSEDT ADFYNPKVIN ASKGSFLRVK VHYTDLSAFL KQQRVSVYGA
DLHGENIHTA SFKEVGILVM GNEAHGISEG VKACITQMLT IPRFGQAESL NVGIATAICC
DRIKSAQSV