Gene CHU_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1893 
Symbolbcp 
ID4186769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2213234 
End bp2213683 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content39% 
IMG OID638071891 
Productbacterioferritin comigratory protein 
Protein accessionYP_678501 
Protein GI110638292 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00670831 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACTAA CGGCTGGCGA CAAAGCCCCT GTATTTAAAG GAACTGATCA AGACGGCAAT 
ACCATCAGCT TAAAAGATTT TGCTGGTAAA AAAGTAGTTT TATACTTTTA TCCGAAAGAC
AATACACCCG GTTGCACCAA ACAGGCGTGC GACTTAAGAG ATAACTACAA TGCGTTGCTG
AAAGCAGGTT ATGTAGTTAT CGGCGTTAGT ACCGATAGTG AGAAATCGCA CCAGAAATTC
ATTAAAAAAT TCGAACTTCC TTTCCCGCTT ATTGCAGACG AAGACAAAAC CATTCACGAA
CAGTACGGTG TATGGGGCGA AAAATCCATG TATGGAAAAA CCTACATGGG CACACTACGC
ACAACGTTTG TTATTGATGA AAAAGGAAAA ATTGAAGAAG TTATTTCAAA AGTAAAAACA
GACGATCATA CTGCACAAAT TTTAAAATAG
 
Protein sequence
MTLTAGDKAP VFKGTDQDGN TISLKDFAGK KVVLYFYPKD NTPGCTKQAC DLRDNYNALL 
KAGYVVIGVS TDSEKSHQKF IKKFELPFPL IADEDKTIHE QYGVWGEKSM YGKTYMGTLR
TTFVIDEKGK IEEVISKVKT DDHTAQILK