Gene CHU_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1872 
Symbol 
ID4184456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2191726 
End bp2192127 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content45% 
IMG OID638071870 
Producthypothetical protein 
Protein accessionYP_678480 
Protein GI110638271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0940466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00129233 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACATCT TTGTTTACGG CACACTTAAG AAGACGTATA AAAACCTCAA TGCATTCACG 
GCTGTCTTTC ATGCGAATAC AGAATGGCTG TGCCATGCGG TTGTAAAAGG CGACATGTAT
ATGAAAGACT GGTACCCGGC GTTGAAGCTG GGCGGAGAAA ATCTGGTCTT CGGTGAGATC
TACCGGATCA ATTCACCTGT ACTGCTGGAA ACGATTGATC AGTATGAAGA TGCTATTACA
CAGGAGGAAT ATGCGATCAA ATTAAAGCAT CTTGACCCGA TCACATCGGA TTATGTACGC
AGGCACATCC GTATCGATGA TATGGAGTGC TGGATCTATG AATACCTGGG CGAAGTGAGT
GAACGCATGC GTATTGAAAA CGGTGTATTT GAGATGCGGT GA
 
Protein sequence
MHIFVYGTLK KTYKNLNAFT AVFHANTEWL CHAVVKGDMY MKDWYPALKL GGENLVFGEI 
YRINSPVLLE TIDQYEDAIT QEEYAIKLKH LDPITSDYVR RHIRIDDMEC WIYEYLGEVS
ERMRIENGVF EMR