| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1865 |
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| Symbol | yebU |
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| ID | 4184449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2186054 |
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| End bp | 2187460 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638071863 |
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| Product | tRNA and rRNA cytosine-C5-methylase |
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| Protein accession | YP_678473 |
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| Protein GI | 110638264 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.92386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000437678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCGGATA TACAATTACC TCAGGCCTTC ATTACTCAGA TGGAGACACT TCTGGGTAAT
GACTATACAG CATTTGAATC AGCATTACTG CGTCCTTCCA GACGCAGTAT ACGTCTGCAT
CCGCATAAAT GGCCGCAGCC GATGGGCTTA ACCCAGGTTC CCTGGTATAA AAATGGTTAT
TGGTTAGACG AAGAGGCTAC CGTAACCTAC GATCCCCTGT TTCATGCCGG CACCTATTAT
GTACAGGAAG CAAGTTCGAT GTTTCTTGCA CAACTGCTTG AAGCCTGTAT CAAAGACAAG
GAAGAACTAA CCGTGCTGGA TCTGTGCGCT GCGCCGGGCG GCAAGTCTAC GTTGATCTGC
GATGTACTGG ATGAAAAACA TTTGCTGATA AGCAACGAAG TAATTAAAAC ACGGGTAAAT
ATTCTGGATG AAAATTTACT GAAGTGGGGG TACAATAATG TGATCGTTAC ACATAACGAC
CCGGCAGACT TTGACCGTTT AGGTACCTTC TTTGATATTA TTGTTGTAGA TGCGCCGTGT
TCGGGCGAAG GGATGTTCCG GAAAGATCCT GCCGCTATCA ACGAATGGGA TACAGCTCAT
GTAGACCTGT GCTGCAGCAG ACAAAGGCGC ATTTTAAGTG ATATCTGGCA GGTGTTAAAA
CCGGGAGGTA TTATTATTTA TTCTACCTGC ACATTTAATC GCAAAGAGAA TGAAGAGAAC
ATGCGCTGGA TGCAGGAACA GTATCAGGCG GAAGGTATTG AGTTAAATAT TCCTGCTTTT
GAAGGTGTTG AAACCGGAAA CGAAAACGGC ATACATTTTT ATCGCTTCTA TCCGCATAAG
GTTACAGGTG AAGGCTTCTT TGCCAGTGTG ATCCGCAAGC CGGAAAGCGC TGCATGGACA
AACCATACCG GTAAGCGCGA AAAGTGGAGC AAAGACCGTA AAGTCCAGCA AAAACAAACC
ATACCGGAGA TAACAAAAAC TATTTTAACA AAAGAAGACG CGTATGTCTT TTTGCATAAA
GAAGAATTCC GTTGTTTCGC TCAAACATTT AAAGATGCAC TGGAACAGAT CAGTATGTGC
CTTAAAATTT ATCGTGCGGG TACTCCGCTT GGTACATTAA AGGGAAAAGA TTTTTTACCG
GATATTGCTG TAGCAATGTC TATTCATCTG AATAAAGAAC TATTTACGTG TATTGAGCTG
AGCTACGAAG AAGCGATTAA GTATCTGAGT AAAGAAGACT TTGTGTTAGC GCAGGAATCA
AGCGGCTGGA ACATTATGTG TTACAAGGGT GTGCCGCTGG GCTGGATCAA AGCCATGCCA
AACCGGTTCA ACAACTACTT TCCGTCTGAA TGGCGCATCC GCAATCAGTG GGACGGCGTG
AGTAAGCGGT TTATGATTGG GGAATAA
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| Protein sequence | MADIQLPQAF ITQMETLLGN DYTAFESALL RPSRRSIRLH PHKWPQPMGL TQVPWYKNGY
WLDEEATVTY DPLFHAGTYY VQEASSMFLA QLLEACIKDK EELTVLDLCA APGGKSTLIC
DVLDEKHLLI SNEVIKTRVN ILDENLLKWG YNNVIVTHND PADFDRLGTF FDIIVVDAPC
SGEGMFRKDP AAINEWDTAH VDLCCSRQRR ILSDIWQVLK PGGIIIYSTC TFNRKENEEN
MRWMQEQYQA EGIELNIPAF EGVETGNENG IHFYRFYPHK VTGEGFFASV IRKPESAAWT
NHTGKREKWS KDRKVQQKQT IPEITKTILT KEDAYVFLHK EEFRCFAQTF KDALEQISMC
LKIYRAGTPL GTLKGKDFLP DIAVAMSIHL NKELFTCIEL SYEEAIKYLS KEDFVLAQES
SGWNIMCYKG VPLGWIKAMP NRFNNYFPSE WRIRNQWDGV SKRFMIGE
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