| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1850 |
|---|
| Symbol | |
|---|
| ID | 4185921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2169734 |
|---|
| End bp | 2170690 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638071849 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_678459 |
|---|
| Protein GI | 110638250 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.25162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00119379 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC TTGATTTTTG GTGGATAAAG GCAATTTTAA GCACCTTTAT CCTCATTTTA
TGCACTTCGT GGGGCTTTTT TGCTCACAAA GAAATAAATA AAATGGCCGT TTTTACGCTG
CCGCATCCAT TAATGTCATT TTATAAGCGG CATATTGATT TTATAACGGA ACAGGCGGTT
AATCCCGATA AACGGAGATA CATCGTTTCC GGTGAAGCGC CGAAACACTA TATGGATATC
GAATATTATT CCGATAGTAT TTTGATTGTC CGCCCGGATT GGAATACTGC ACAGGCAATT
TATCCGGAAG ATTCTCTTCA TGCACATGGT ATACTTCCAT GGAACCTGGT CCGGTTAACC
TACAGACTAA CCGATGCATT TAAACACCGG GATGCTAAAA GTATTTTAAA GTTATCAGCC
GACCTCGGCC ATTATGTAGG TGATCTTCAT GTACCGTTGC ATACAACTAA AAACTATAAC
GGCCAACTTA CCGGACAACA GGGCATTCAT GGTTTGTGGG AATCACGCTT ACCGGAATTA
TTTTCCGCTG ATTATAATTA TTATTTAGGT ACAGCTAATT ATGTTACTGA TATTAAAAAA
GTTGTGTGGG AGTCAATGAC CGAATCCAGA GCATGTGTTG CTCAGGTATT GGCTGTTGAA
TTAAAATTAC AGCAGCAAAT GAAGGCAGAT AAAATTTTTT CATATGAAGA CCGAAACGGA
CAAACAGTCC GGGTATACTC ATATGATTTT AGCAACGCAT ATCACAAGGC TCTTGAAGAT
ATGGTACAGA AGCGGATGCG CGCAGCCATT AAATGTACTG GCGATTTATG GTATACCTGC
TGGGTAAATG CGGGCCGGCC AGACCCGGCA GCATTCGATG AACCAGTATA TTCACAAGAA
GAGTTAGAAG AAATGGAAAA ATTAAAATCA GTTTCAAGTG AAACATGTTC ACATTGA
|
|---|
| Protein sequence | MKKLDFWWIK AILSTFILIL CTSWGFFAHK EINKMAVFTL PHPLMSFYKR HIDFITEQAV
NPDKRRYIVS GEAPKHYMDI EYYSDSILIV RPDWNTAQAI YPEDSLHAHG ILPWNLVRLT
YRLTDAFKHR DAKSILKLSA DLGHYVGDLH VPLHTTKNYN GQLTGQQGIH GLWESRLPEL
FSADYNYYLG TANYVTDIKK VVWESMTESR ACVAQVLAVE LKLQQQMKAD KIFSYEDRNG
QTVRVYSYDF SNAYHKALED MVQKRMRAAI KCTGDLWYTC WVNAGRPDPA AFDEPVYSQE
ELEEMEKLKS VSSETCSH
|
|---|
| |