Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1828 |
Symbol | groEL |
ID | 4183872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2145245 |
End bp | 2146873 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638071827 |
Product | chaperonin GroEL |
Protein accession | YP_678437 |
Protein GI | 110638228 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.320328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0519558 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGC AAATTTTATT TGACAGAGAC GCCCGCGAAA AATTGAAAAA AGGTGTTGAT GCATTGGCAG ATGCAGTAAA AGTAACCCTT GGCCCTAAAG GAAGAAATGT AATTTTAGAT AAAAAATTCG GTTCACCTGC TATCACAAAA GATGGGGTTT CTGTAGCAAA AGACATTGAG TTGAAAGATG CTATCGAAAA TATGGGCGCA CAATTAGTTA AAGAAGTTGC ATCAAAAACC GCTGATCAGG CTGGTGACGG TACAACGACT GCGACTGTTT TAACGCAGGC AATTTTCAAT GCAGGTTTAA AAAACGTTGC AGCCGGCGCT AACCCAATGG ATCTTAAGAG AGGTATTGAT AAAGCAGTTT CTGCGATCAT TGCAGATCTT AAAGTTCAGT CTAAAAAAAT CTCTAATTCA AACGAGATCG CACAGGTTGC TACAATCTCT GCCAACAACG ACCACGAAAT CGGTAAAATG ATTGCACATG CAATGGATAA AGTTGGTAAA GATGGTGTTA TTACTGTTGA AGAAGCTAAA GGTACTGAAA CAGAAGTAAA AACTGTTGAA GGTATGCAAT TTGACCGTGG ATACTTATCG CCTTACTTCG TTACGAATAC AGATAAAATG GAAGTTGAGT TAGATCGTCC ATATATTCTG ATCTACGATA AAAAAGTTTC TTCTATGAAG GAATTACTTC CGATTCTTGA ACAAGTTGTT CAGTCCGGAA GACCGTTGTT AATCATTGCG GAAGATGTTG ACGGTGAAGC ATTAGCTACA CTTGTTGTAA ACAAAATCCG TGGTGCACTG AAAATCGCGG CTGTTAAAGC TCCGGGCTTC GGTGACAGAA GAAAAGCTAT GTTGGAAGAC ATCGCAATTT TAACAGGCGG TACAGTTATT TCTGAAGAAA GCGGATACAA ATTAGAAAAC GCTACACTTG AATATTTAGG TACAGCTGAA AAGATCAATA TTGATAAAGA CAACACAACG GTTGTTAATG GTTCAGGTTT AAAAGATAAT ATCGTTGCAC GTGTTAACCA GATCAAATCT CAGATGGAAA ATACTACGTC TGATTACGAT CGCGAAAAAC TTCAGGAGCG TTTAGCTAAA TTATCCGGTG GCGTTGCTAT CATGTATATT GGTGCAGCTA CAGAAGTTGA AATGAAAGAG AAAAAAGACC GTGTGGATGA TGCATTGCAT GCTACACGTG CTGCTGTTGA AGAAGGTATC GTACCAGGTG GTGGCGTTGC GTTGATCAGA GCAGGTGCTG CTTTAGATAA CGTTGCATTC CACAATGAAG ATGAAAAAAC AGGCATTCAG ATCATCCGTA CGGCAATTGA ATCTCCTTTA CGTGCTATCG TGTACAATGC AGGCCTTGAA GGTTCTGTAA TTGTTCAGAA AGTGAAAGAA GGCACAGGCG ATTACGGATA CAATGCCCGT GAAGACAGAT ACGAAGCAAT GATTGCTGCA GGTATTATTG ACCCTACTAA AGTAACTCGT TTGGCGTTAG AAAATGCTGC TTCTGTGGCA TCTCTTCTAT TAACTACGGA ATGTGTAGTG GCTGACGAAC CGGAAGAAAA ATCTGCTATG CCTCCAATGG GCGGCGGCGG AATGGGTGGC ATGATGTAA
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Protein sequence | MAKQILFDRD AREKLKKGVD ALADAVKVTL GPKGRNVILD KKFGSPAITK DGVSVAKDIE LKDAIENMGA QLVKEVASKT ADQAGDGTTT ATVLTQAIFN AGLKNVAAGA NPMDLKRGID KAVSAIIADL KVQSKKISNS NEIAQVATIS ANNDHEIGKM IAHAMDKVGK DGVITVEEAK GTETEVKTVE GMQFDRGYLS PYFVTNTDKM EVELDRPYIL IYDKKVSSMK ELLPILEQVV QSGRPLLIIA EDVDGEALAT LVVNKIRGAL KIAAVKAPGF GDRRKAMLED IAILTGGTVI SEESGYKLEN ATLEYLGTAE KINIDKDNTT VVNGSGLKDN IVARVNQIKS QMENTTSDYD REKLQERLAK LSGGVAIMYI GAATEVEMKE KKDRVDDALH ATRAAVEEGI VPGGGVALIR AGAALDNVAF HNEDEKTGIQ IIRTAIESPL RAIVYNAGLE GSVIVQKVKE GTGDYGYNAR EDRYEAMIAA GIIDPTKVTR LALENAASVA SLLLTTECVV ADEPEEKSAM PPMGGGGMGG MM
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